RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ZNF45Q02386 682 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 SYPL1Q16563 259 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 C1orf220Q5T0J3 134 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 TMEM71Q6P5X7 295 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 BSCL2Q96G97 398 aaPredicted RBP12.88□□□□□ -0.35
VAPA-202ENST00000400000 TRAPPC2LH3BP13 241 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 KLF11O14901 512 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 TFP02787 698 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 SSTR2P30874 369 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 DCTP40126 519 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 DCP2Q8IU60 420 aaKnown RBP12.88□□□□□ -0.35
VAPA-202ENST00000400000 LINC00346Q8IVM7 164 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 SNIP1Q8TAD8 396 aaKnown RBP12.88□□□□□ -0.35
VAPA-202ENST00000400000 INTS14Q96SY0 518 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 VN1R3Q9BXE9 311 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 TRAPPC2LQ9UL33 140 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 ARPC1BO15143 372 aaKnown RBP12.88□□□□□ -0.35
VAPA-202ENST00000400000 FCGR2AP12318 317 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 DPP4P27487 766 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 CHRNB4P30926 498 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 EDDM3BP56851 147 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 ZNF33AQ06730 810 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 ARHGAP19Q14CB8 494 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 POU4F3Q15319 338 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 OR1Q1Q15612 314 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 LEXMQ3ZCV2 418 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 ZNF529Q6P280 563 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 TSSK4Q6SA08 328 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 CD93Q9NPY3 652 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 THSD1Q9NS62 852 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 ZDHHC7Q9NXF8 308 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 NOSIPQ9Y314 301 aaKnown RBP12.88□□□□□ -0.35
VAPA-202ENST00000400000 OXSR1O95747 527 aaPredicted RBP12.88□□□□□ -0.35
VAPA-202ENST00000400000 IGFBP1P08833 259 aaPredicted RBP12.88□□□□□ -0.35
VAPA-202ENST00000400000 CRABP1P29762 137 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 GLO1Q04760 184 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 FAPQ12884 760 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 SLC14A1Q13336 389 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 SERTAD2Q14140 314 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 ARNT2Q9HBZ2 717 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 STYXL1Q9Y6J8 313 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 MYH1P12882 1939 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 HSD17B6O14756 317 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 DENRO43583 198 aaKnown RBP12.88□□□□□ -0.35
VAPA-202ENST00000400000 PRSS3P35030 304 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 TNFRSF4P43489 277 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 RGRP47804 291 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 SLC16A14Q7RTX9 510 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 BPIFA2Q96DR5 249 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 BMFQ96LC9 184 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 ACPTQ9BZG2 426 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 HOXD1Q9GZZ0 328 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 USP22Q9UPT9 525 aa12.88□□□□□ -0.35
VAPA-202ENST00000400000 C10orf71Q711Q0 1435 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 GAAP10253 952 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 MGST1P10620 155 aaKnown RBP12.87□□□□□ -0.35
VAPA-202ENST00000400000 ITGB7P26010 798 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 IL2RGP31785 369 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 PRPS1P60891 318 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 IKZF1Q13422 519 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 STT3BQ8TCJ2 826 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 ARSGQ96EG1 525 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 PRR14Q9BWN1 585 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 PELI2Q9HAT8 420 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 GALNT9Q9HCQ5 603 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 LRRTM2O43300 516 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 AQP9O43315 295 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 C1orf105O95561 183 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 VEGFCP49767 419 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 Q6ZPB1 254 aaPredicted RBP12.87□□□□□ -0.35
VAPA-202ENST00000400000 ESPNLQ6ZVH7 1005 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 CHDHQ8NE62 594 aaPredicted RBP12.87□□□□□ -0.35
VAPA-202ENST00000400000 OR14K1Q8NGZ2 314 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 TBC1D20Q96BZ9 403 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 DUSP23Q9BVJ7 150 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 FAM166BA8MTA8 275 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 MYF5P13349 255 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 ENDOVQ8N8Q3 282 aaKnown RBP12.87□□□□□ -0.35
VAPA-202ENST00000400000 B3GNT7Q8NFL0 401 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 DTD2Q96FN9 168 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 INSM2Q96T92 566 aaPredicted RBP12.87□□□□□ -0.35
VAPA-202ENST00000400000 KLF16Q9BXK1 252 aaPredicted RBP12.87□□□□□ -0.35
VAPA-202ENST00000400000 TUBB1Q9H4B7 451 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 ELOVL3Q9HB03 270 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 EHFQ9NZC4 300 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 LPLP06858 475 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 C1SP09871 688 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 SLC2A1P11166 492 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 TCN2P20062 427 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 SLC14A2Q15849 920 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 SLC39A11Q8N1S5 342 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 SLC15A4Q8N697 577 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 EGLN2Q96KS0 407 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 SAP130Q9H0E3 1048 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 PHYHO14832 338 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 MAOAP21397 527 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 GJA4P35212 333 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 GPR85P60893 370 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 PRICKLE2Q7Z3G6 844 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms