RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TIMP4Q99727 224 aa11.21□□□□□ -0.61
HLA-DQB1-203ENST00000399082 LRMDAQ9H2I8 198 aa11.21□□□□□ -0.61
HLA-DQB1-203ENST00000399082 LDAHQ9H6V9 325 aa11.21□□□□□ -0.61
HLA-DQB1-203ENST00000399082 GORASP2Q9H8Y8 452 aa11.21□□□□□ -0.61
HLA-DQB1-203ENST00000399082 MAGEL2Q9UJ55 1249 aa11.21□□□□□ -0.61
HLA-DQB1-203ENST00000399082 ZNF337Q9Y3M9 751 aa11.21□□□□□ -0.61
HLA-DQB1-203ENST00000399082 SNX13Q9Y5W8 968 aa11.21□□□□□ -0.61
HLA-DQB1-203ENST00000399082 KIAA1549Q9HCM3 1950 aa11.21□□□□□ -0.62
HLA-DQB1-203ENST00000399082 NPIPA2E9PIF3 369 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 NPIPA3F8WFD2 350 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 H0YC42 278 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ACOT8O14734 319 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 DNAJC8O75937 253 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ATP5HO75947 161 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 THY1P04216 161 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 GNLYP22749 145 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ME2P23368 584 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CHMP24386 653 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TPD52P55327 224 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CLDN18P56856 261 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RGS8P57771 180 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SELENOWP63302 87 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 BNIP2Q12982 314 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ELOAQ14241 798 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 Q6ZPB1 254 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PLEKHM3Q6ZWE6 761 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ZNF550Q7Z398 422 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 GGNQ86UU5 652 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 BHLHE22Q8NFJ8 381 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TNIP2Q8NFZ5 429 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 VANGL1Q8TAA9 524 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SLC26A7Q8TE54 656 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ABTB1Q969K4 478 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 UTP4Q969X6 686 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 FAM162AQ96A26 154 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 C3orf49Q96BT1 292 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CCDC124Q96CT7 223 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 WDYHV1Q96HA8 205 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 HSH2DQ96JZ2 352 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PIGQQ9BRB3 760 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ADAM19Q9H013 955 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CACYBPQ9HB71 228 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CTPS2Q9NRF8 586 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PNPLA3Q9NST1 481 aa11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 DCAF13Q9NV06 445 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TESQ9UGI8 421 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RELNP78509 3460 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TCRBV5S2A0A599 114 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 OR14I1A6ND48 311 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 KDM4EB2RXH2 506 aaPredicted RBP11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 EBAG9O00559 213 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SLC19A2O60779 497 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 LYPD3O95274 346 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ACTL6AO96019 429 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SEMG1P04279 462 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ZNF708P17019 499 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 FUT4P22083 530 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ADH6P28332 368 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PTGS2P35354 604 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 OR1E2P47887 323 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CLDN20P56880 219 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 GABPB1Q06547 395 aaPredicted RBP11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TRIM25Q14258 630 aaKnown RBP11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CTU2Q2VPK5 515 aaKnown RBP11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 IQCCQ4KMZ1 466 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 LCN8Q6JVE9 175 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ENPP6Q6UWR7 440 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CCDC121Q6ZUS5 278 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CARM1Q86X55 608 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ADGRG3Q86Y34 549 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ULK2Q8IYT8 1036 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 LSMEM1Q8N8F7 131 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 OR52E4Q8NGH9 312 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 FAM57AQ8TBR7 257 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RASSF5Q8WWW0 418 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ASB9Q96DX5 294 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TPD52L3Q96J77 140 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ADGRG7Q96K78 797 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 MRGPRX4Q96LA9 322 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PRDM14Q9GZV8 571 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ARMC7Q9H6L4 198 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 EXO5Q9H790 373 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ACTR3BQ9P1U1 418 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SLC7A8Q9UHI5 535 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 OSGIN1Q9UJX0 560 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 BAG5Q9UL15 447 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SH3GLB1Q9Y371 365 aa11.19□□□□□ -0.62
HLA-DQB1-203ENST00000399082 A0A1B0GWA3 101 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 H3BML4 177 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 FMO6PO60774 539 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PRKD3O94806 890 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ZNF682O95780 498 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 IFNA14P01570 189 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 OPN1LWP04000 364 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PEPDP12955 493 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 GP1BBP13224 206 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PLA2G2AP14555 144 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CPN1P15169 458 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ELK4P28324 431 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TACR3P29371 465 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms