RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FABP3P05413 133 aa21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 PRKCAP17252 672 aa21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 YAP1P46937 504 aaKnown RBP21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 VLDLRP98155 873 aa21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 FOXF1Q12946 379 aa21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 WIPI1Q5MNZ9 446 aaPredicted RBP21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 ZDHHC21Q8IVQ6 265 aa21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 OR5M1Q8NGP8 315 aa21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 TSPAN10Q9H1Z9 355 aaPredicted RBP21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 ZDHHC11Q9H8X9 412 aa21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 PRDM4Q9UKN5 801 aa21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 ENPP4Q9Y6X5 453 aa21.39■■□□□ 1.02
TSPAN4-203ENST00000397397 SHISA8B8ZZ34 492 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 RAP2AP10114 183 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 MST1P26927 711 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 SLC1A3P43003 542 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 TAS2R41P59536 307 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 FOXK1P85037 733 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 NFATC3Q12968 1075 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 GLYR1Q49A26 553 aaPredicted RBP21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 RAET1LQ5VY80 246 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 LSMEM1Q8N8F7 131 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 PHF10Q8WUB8 498 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 NPAS1Q99742 590 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 IL1RAPQ9NPH3 570 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 ATRXP46100 2492 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 A0A1B0GWA3 101 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 NPIPA5E9PKD4 350 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 J3KTA2 159 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 MT-ND1P03886 318 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 ITGA2P17301 1181 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 EIF1P41567 113 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 MERTKQ12866 999 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 CMPK2Q5EBM0 449 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 SLC25A53Q5H9E4 307 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 TSEN54Q7Z6J9 526 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 TSPYL5Q86VY4 417 aaPredicted RBP21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 CYP4Z1Q86W10 505 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 SIAH3Q8IW03 269 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 POC1BQ8TC44 478 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 MRGPRX4Q96LA9 322 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 ZNF300Q96RE9 604 aaPredicted RBP21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 SLC6A15Q9H2J7 730 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 ACKR4Q9NPB9 350 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 CCM2LQ9NUG4 571 aaPredicted RBP21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 NDUFAF4Q9P032 175 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 NPIPA1Q9UND3 350 aa21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 FAM32AQ9Y421 112 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-203ENST00000397397 BSNQ9UPA5 3926 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 SEMA7AO75326 666 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 PIN1Q13526 163 aaPredicted RBP21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 GRINAQ7Z429 371 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 GTPBP8Q8N3Z3 284 aaPredicted RBP21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 RNF217Q8TC41 542 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 ADAMTS16Q8TE57 1224 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 SLCO4A1Q96BD0 722 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 PRRC1Q96M27 445 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 PIGQQ9BRB3 760 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 POLR2J2Q9GZM3 115 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 ADAM19Q9H013 955 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 POLR2J3Q9H1A7 115 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 LDAHQ9H6V9 325 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 EXO5Q9H790 373 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 SELENONQ9NZV5 590 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 A4GNTQ9UNA3 340 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 LIPGQ9Y5X9 500 aa21.37■■□□□ 1.01
TSPAN4-203ENST00000397397 C7orf72A4D263 438 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 TRAPPC13A5PLN9 417 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 TTLL8A6PVC2 850 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 ETV2O00321 342 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 DIRAS1O95057 198 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 WISP1O95388 367 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 ZNF17P17021 662 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 HOXB6P17509 224 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 TACR3P29371 465 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 HTR3AP46098 478 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 DLX5P56178 289 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 TMEM44Q2T9K0 475 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 PRR30Q53SZ7 412 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 ZNF613Q6PF04 617 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 POMZP3Q6PJE2 187 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 PIWIL3Q7Z3Z3 882 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 C3orf49Q96BT1 292 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 SNRNP40Q96DI7 357 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 SFXN2Q96NB2 322 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 CHID1Q9BWS9 393 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 SLC6A5Q9Y345 797 aa21.36■■□□□ 1.01
TSPAN4-203ENST00000397397 A0A0B4J2E0 115 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 A0A1B0GX12 115 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 OR2M5A3KFT3 312 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 FKBP6O75344 327 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 OR5F1O95221 314 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 NTN1O95631 604 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 RHCEP18577 417 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 ADH6P28332 368 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 SLC7A1P30825 629 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 IFNA8P32881 189 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 MAGEA2P43356 314 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 POLR2HP52434 150 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 B3GALT5-AS1P59052 145 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms