RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 LOC100996750A0A140TA64 210 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ZNF724A8MTY0 619 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 SHISA9B4DS77 424 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 F8W735 103 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-208ENST00000397204 G3V2L1 256 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 GTPBP1O00178 669 aaKnown RBP7.74□□□□□ -1.17
CAPN3-208ENST00000397204 AKAP10O43572 662 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 SSX4O60224 188 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 GPRIN2O60269 458 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 NUDT14O95848 222 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 HMGN2P05204 90 aaKnown RBP7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ATP6V1C1P21283 382 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ENPP1P22413 925 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 SHC1P29353 583 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ECHS1P30084 290 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ASMTP46597 345 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 C21orf58P58505 322 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ZNF117Q03924 483 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 LOXL1Q08397 574 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-208ENST00000397204 FOXF1Q12946 379 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 PDE7AQ13946 482 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 WHAMMP3Q1A5X7 153 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ARL13AQ5H913 290 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-208ENST00000397204 SLC25A53Q5H9E4 307 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 CFAP157Q5JU67 520 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 C6orf52Q5T4I8 152 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ANKRD26P1Q6NSI1 321 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ZYG11AQ6WRX3 759 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 TRMT10CQ7L0Y3 403 aaKnown RBP7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.74□□□□□ -1.17
CAPN3-208ENST00000397204 R3HCC1LQ7Z5L2 792 aaKnown RBP7.74□□□□□ -1.17
CAPN3-208ENST00000397204 GPR119Q8TDV5 335 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 ZFP90Q8TF47 636 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 KLHDC3Q9BQ90 382 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 BEX2Q9BXY8 128 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 KRTAP4-6Q9BYQ5 205 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 CARD8Q9Y2G2 431 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 TMED5Q9Y3A6 229 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 SVEP1Q4LDE5 3571 aa7.74□□□□□ -1.17
CAPN3-208ENST00000397204 IGHV4-30-2A0A087WSY4 118 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 FAM234BA2RU67 622 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 OR5H1A6NKK0 313 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 ETV2O00321 342 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 PHF1O43189 567 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 EIF4E2O60573 245 aaKnown RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CYTIPO60759 359 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 LYZL6O75951 148 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 URI1O94763 535 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 KRT16P08779 473 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 SLC25A16P16260 332 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 PRKCAP17252 672 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 GGT1P19440 569 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 SLC7A1P30825 629 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 TTKP33981 857 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CCT5P48643 541 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 ATP12AP54707 1039 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CDH11P55287 796 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 VLDLRP98155 873 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 RASGEF1BQ0VAM2 473 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 RAB35Q15286 201 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 TOMM34Q15785 309 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 STK11Q15831 433 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 TMEM249Q2WGJ8 235 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CCDC153Q494R4 210 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 RFTN2Q52LD8 501 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 ZNF385BQ569K4 471 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CCNJQ5T5M9 372 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CDC73Q6P1J9 531 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CLEC2AQ6UVW9 174 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CBLN3Q6UW01 205 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 TMEM108Q6UXF1 575 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 RNF165Q6ZSG1 346 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 SZRD1Q7Z422 152 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 GALNT5Q7Z7M9 940 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 ATG4DQ86TL0 474 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 ZNF100Q8IYN0 542 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 ZNF433Q8N7K0 673 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 MNS1Q8NEH6 495 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 ATP6V1C2Q8NEY4 427 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 FBXO30Q8TB52 745 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 ZNF75CPQ92670 426 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CDS1Q92903 461 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 FAM120BQ96EK7 910 aaKnown RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CHMP6Q96FZ7 201 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 DHRS9Q9BPW9 319 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 PSD2Q9BQI7 771 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 ACTRT3Q9BYD9 372 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CXorf36Q9H7Y0 433 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 COQ10BQ9H8M1 238 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 CBLN4Q9NTU7 201 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 OXSMQ9NWU1 459 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 LPAR3Q9UBY5 353 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 BAIAP2L1Q9UHR4 511 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 ING1Q9UK53 422 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-208ENST00000397204 EMCNQ9ULC0 261 aa7.73□□□□□ -1.17
CAPN3-208ENST00000397204 A0A096LNT2 108 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 IGHV3-15A0A0B4J1V0 119 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 C9JVG2 144 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 E7EQL1 145 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 NPIPB9F8W1W9 429 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms