RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TRUB1Q8WWH5 349 aaKnown RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 PMM1Q92871 262 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 THOC3Q96J01 351 aaKnown RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 NXF5Q9H1B4 397 aaKnown RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 SLC25A19Q9HC21 320 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 RAXQ9Y2V3 346 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 WDR45Q9Y484 360 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 OR10H1Q9Y4A9 318 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 ACACAQ13085 2346 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 AGAP5A6NIR3 686 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 KIAA0513O60268 411 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 BCAS1O75363 584 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 ITGA3P26006 1051 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 ST13P50502 369 aaKnown RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 NR0B1P51843 470 aaKnown RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 POU6F2P78424 691 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 CHAF1BQ13112 559 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 TRAM2Q15035 370 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 EIPR1Q53HC9 387 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 JMJD6Q6NYC1 403 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 ZNF441Q8N8Z8 693 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 TOR1AIP2Q8NFQ8 470 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 C9orf43Q8TAL5 461 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 TBC1D15Q8TC07 691 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 PIK3R3Q92569 461 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 TP53INP1Q96A56 240 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 HSPBAP1Q96EW2 488 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 POLR2J2Q9GZM3 115 aaKnown RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 POLR2J3Q9H1A7 115 aaKnown RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 KLHL28Q9NXS3 571 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 SLC13A4Q9UKG4 626 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 A0A087WUU8 490 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 GXYLT2A0PJZ3 443 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 EFCAB10A6NFE3 127 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 M0R129 80 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 WWP2O00308 870 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 CYP7B1O75881 506 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 OR5F1O95221 314 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 INHBBP09529 407 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 GSTM3P21266 225 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 TRHRP34981 398 aaPredicted RBP13.67□□□□□ -0.22
CAPN3-207ENST00000397200 NUDT6P53370 316 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 NRG3P56975 720 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 TAS2R41P59536 307 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 PSPHP78330 225 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 TLE3Q04726 772 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 ST3GAL3Q11203 375 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 SLC25A30Q5SVS4 291 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 ZNF836Q6ZNA1 936 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 PEX5LQ8IYB4 626 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 ZNF619Q8N2I2 560 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 ZCCHC14Q8WYQ9 949 aaKnown RBP13.67□□□□□ -0.22
CAPN3-207ENST00000397200 SLC38A4Q969I6 547 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 CDCA4Q9BXL8 241 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 POLE3Q9NRF9 147 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 MYOTQ9UBF9 498 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 CBLCQ9ULV8 474 aa13.67□□□□□ -0.22
CAPN3-207ENST00000397200 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
CAPN3-207ENST00000397200 DOCK10Q96BY6 2186 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 TMEM200CA6NKL6 621 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 CLDN24A6NM45 220 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 TO15178 435 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 SLC22A1O15245 554 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 SOX14O95416 240 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 BCL10O95999 233 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 LCKP06239 509 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 ZNF182P17025 639 aaPredicted RBP13.66□□□□□ -0.22
CAPN3-207ENST00000397200 C21orf33P30042 268 aaPredicted RBP13.66□□□□□ -0.22
CAPN3-207ENST00000397200 ZNF136P52737 540 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 CDK5Q00535 292 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 DCTN2Q13561 401 aaKnown RBP13.66□□□□□ -0.22
CAPN3-207ENST00000397200 SPCS2Q15005 226 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 LARS2Q15031 903 aaKnown RBP13.66□□□□□ -0.22
CAPN3-207ENST00000397200 DEFB109BQ30KR1 87 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 DCST2Q5T1A1 773 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 PTCHD4Q6ZW05 846 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 P2RY8Q86VZ1 359 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 CLIP4Q8N3C7 705 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 GALNT16Q8N428 558 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 OR4N2Q8NGD1 307 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 BRIX1Q8TDN6 353 aaKnown RBP13.66□□□□□ -0.22
CAPN3-207ENST00000397200 GPA33Q99795 319 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 SH3GL3Q99963 347 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 CLN6Q9NWW5 311 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 GPR83Q9NYM4 423 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 MRTO4Q9UKD2 239 aaKnown RBP13.66□□□□□ -0.22
CAPN3-207ENST00000397200 MKLN1Q9UL63 735 aa13.66□□□□□ -0.22
CAPN3-207ENST00000397200 TMEM8BA6NDV4 472 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 M0R082 166 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 KLF4O43474 513 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 MAN1A2O60476 641 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 STX11O75558 287 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 KCNK2O95069 426 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 DBIP07108 87 aaKnown RBP13.65□□□□□ -0.22
CAPN3-207ENST00000397200 IGFBP1P08833 259 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-207ENST00000397200 PSMB9P28065 219 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 IFNGR2P38484 337 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 RFX3P48380 749 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 UCNP55089 124 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 RGS8P57771 180 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms