RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 TESK1Q15569 626 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 TTMPQ5BVD1 217 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 PPP4R4Q6NUP7 873 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 VWA1Q6PCB0 445 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 SPNS3Q6ZMD2 512 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 BEND4Q6ZU67 534 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 MAVSQ7Z434 540 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 BTLAQ7Z6A9 289 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 PEX5LQ8IYB4 626 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 ZNF440Q8IYI8 595 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 ARFGAP2Q8N6H7 521 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 RFWD2Q8NHY2 731 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 RAB8BQ92930 207 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 OR52B2Q96RD2 323 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 USB1Q9BQ65 265 aaKnown RBP12.49□□□□□ -0.41
SEC13-204ENST00000397099 OR10A4Q9H209 315 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 ARMC7Q9H6L4 198 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 ACER3Q9NUN7 267 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 MRGBPQ9NV56 204 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 TEP1Q99973 2627 aaKnown RBP12.49□□□□□ -0.41
SEC13-204ENST00000397099 AGAP5A6NIR3 686 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 C16orf97H3BN30 126 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 FAAHO00519 579 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 DNPH1O43598 174 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 CYP7B1O75881 506 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 AQP8O94778 261 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 IL7RP16871 459 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 SFTPDP35247 375 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 KCNJ5P48544 419 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 ATP4BP51164 291 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 CRISP3P54108 245 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 CSNK2A1P68400 391 aaPredicted RBP12.48□□□□□ -0.41
SEC13-204ENST00000397099 SIRPAP78324 504 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 FUT5Q11128 374 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 FADDQ13158 208 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 ZNF239Q16600 458 aaKnown RBP12.48□□□□□ -0.41
SEC13-204ENST00000397099 TMEM176BQ3YBM2 270 aaPredicted RBP12.48□□□□□ -0.41
SEC13-204ENST00000397099 ZNF563Q8TA94 476 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 RNF128Q8TEB7 428 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 MAGEB18Q96M61 343 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 INPP5KQ9BT40 448 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 TMEM185BQ9H7F4 350 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 TPT1P8Q9HAU6 139 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 KLHL9Q9P2J3 617 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 KCNE5Q9UJ90 142 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 TESMINQ9Y4I5 508 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 ABCA4P78363 2273 aa12.48□□□□□ -0.41
SEC13-204ENST00000397099 OIP5O43482 229 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 PRKD3O94806 890 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 NID1P14543 1247 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 PPIBP23284 216 aaKnown RBP12.47□□□□□ -0.41
SEC13-204ENST00000397099 UGT2B10P36537 528 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 CDKN2CP42773 168 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 IDH3AP50213 366 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 CASP9P55211 416 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 SESN3P58005 492 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 CHRNEQ04844 493 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 MERTKQ12866 999 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 MAPK14Q16539 360 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 TIGD2Q4W5G0 525 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 TMEM201Q5SNT2 666 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 C6orf10Q5SRN2 563 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 PRAMEF8Q5VWM4 474 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 PRAMEF7Q5VXH5 474 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 ZNF474Q6S9Z5 364 aaPredicted RBP12.47□□□□□ -0.41
SEC13-204ENST00000397099 PLXDC2Q6UX71 529 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 GRINAQ7Z429 371 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 LINC01560Q8TB33 94 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 WDR60Q8WVS4 1066 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 ZHX1-C8orf76Q96EF9 292 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 MED18Q9BUE0 208 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 HDHD5Q9BXW7 423 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 SLC38A1Q9H2H9 487 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 KLHL13Q9P2N7 655 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 ZNF232Q9UNY5 417 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 TRIM33Q9UPN9 1127 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 CORO2BQ9UQ03 480 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 HIVEP1P15822 2718 aa12.47□□□□□ -0.41
SEC13-204ENST00000397099 ITPR3Q14573 2671 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 A0A096LPI6 279 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 A0A0G2JPF8 293 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 HNRNPCL2B2RXH8 293 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 HNRNPCL3B7ZW38 293 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 HNRNPCL1O60812 293 aaKnown RBP12.46□□□□□ -0.41
SEC13-204ENST00000397099 GSNP06396 782 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 THBS1P07996 1170 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 HNRNPCL4P0DMR1 293 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 RPS4Y1P22090 263 aaKnown RBP12.46□□□□□ -0.41
SEC13-204ENST00000397099 ENPP1P22413 925 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 CRATP43155 626 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 IST1P53990 364 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 AQP5P55064 265 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 RIPPLY3P57055 190 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 DSTNP60981 165 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 LARS2Q15031 903 aaKnown RBP12.46□□□□□ -0.41
SEC13-204ENST00000397099 TOMM34Q15785 309 aaPredicted RBP12.46□□□□□ -0.41
SEC13-204ENST00000397099 SYPL1Q16563 259 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 NDUFAF6Q330K2 333 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 LIN52Q52LA3 116 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 PLEKHM3Q6ZWE6 761 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms