RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TIGARQ9NQ88 270 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 ING1Q9UK53 422 aaPredicted RBP16.3■□□□□ 0.2
FXN-203ENST00000396366 GPR45Q9Y5Y3 372 aa16.3■□□□□ 0.2
FXN-203ENST00000396366 ROS1P08922 2347 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 CLDN24A6NM45 220 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 GJE1A6NN92 205 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 HMGN4O00479 90 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 KIAA0513O60268 411 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 PRKD3O94806 890 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 PABPC4LP0CB38 370 aaKnown RBP16.29■□□□□ 0.2
FXN-203ENST00000396366 CHI3L1P36222 383 aaPredicted RBP16.29■□□□□ 0.2
FXN-203ENST00000396366 PGM1P36871 562 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 MAGOHP61326 146 aaKnown RBP16.29■□□□□ 0.2
FXN-203ENST00000396366 NKX6-1P78426 367 aaPredicted RBP16.29■□□□□ 0.2
FXN-203ENST00000396366 PLAURQ03405 335 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 CHRNEQ04844 493 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 SELENBP1Q13228 472 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 RNPS1Q15287 305 aaKnown RBP16.29■□□□□ 0.2
FXN-203ENST00000396366 ACKR1Q16570 336 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 TMEM201Q5SNT2 666 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 ATAD3BQ5T9A4 648 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 ALKBH2Q6NS38 261 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 FRRS1Q6ZNA5 592 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 EIF3MQ7L2H7 374 aaKnown RBP16.29■□□□□ 0.2
FXN-203ENST00000396366 RNF130Q86XS8 419 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 ACTR6Q9GZN1 396 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 SAP130Q9H0E3 1048 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 THAP1Q9NVV9 213 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 BEX4Q9NWD9 120 aaPredicted RBP16.29■□□□□ 0.2
FXN-203ENST00000396366 KLHL13Q9P2N7 655 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 BTNL2Q9UIR0 455 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 WDR45Q9Y484 360 aa16.29■□□□□ 0.2
FXN-203ENST00000396366 RAI1Q7Z5J4 1906 aaPredicted RBP16.28■□□□□ 0.2
FXN-203ENST00000396366 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.28■□□□□ 0.2
FXN-203ENST00000396366 CCDC154A6NI56 674 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 HDAC3O15379 428 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 ADAM11O75078 769 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 GCM2O75603 506 aaPredicted RBP16.28■□□□□ 0.2
FXN-203ENST00000396366 PLAUP00749 431 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 SLC7A1P30825 629 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 RYKP34925 604 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 KHKP50053 298 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 MERTKQ12866 999 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 SYPL1Q16563 259 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 GPAT3Q53EU6 434 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 TFAP2EQ6VUC0 442 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 SPATA19Q7Z5L4 167 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 STK32CQ86UX6 486 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 WFDC8Q8IUA0 241 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 KIRREL3Q8IZU9 778 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 ZNF619Q8N2I2 560 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 ANKFN1Q8N957 763 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 DNAJA3Q96EY1 480 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 OR5B2Q96R09 309 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 OR52E6Q96RD3 313 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 PANX1Q96RD7 426 aa16.28■□□□□ 0.2
FXN-203ENST00000396366 ZNF814B7Z6K7 855 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 SMAD9O15198 467 aaKnown RBP16.27■□□□□ 0.2
FXN-203ENST00000396366 AGR2O95994 175 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 PGRP06401 933 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 YES1P07947 543 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 PPP3CBP16298 524 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 EDNRAP25101 427 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 RAC3P60763 192 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 DPY19L1Q2PZI1 675 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 SLC9B1Q4ZJI4 515 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 COX20Q5RI15 118 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 AP1ARQ63HQ0 302 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 NXNQ6DKJ4 435 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 ZNF621Q6ZSS3 439 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 PLEKHM3Q6ZWE6 761 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.27■□□□□ 0.2
FXN-203ENST00000396366 MAVSQ7Z434 540 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 GABRG1Q8N1C3 465 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 FAM71CQ8NEG0 241 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 PNPT1Q8TCS8 783 aaKnown RBP16.27■□□□□ 0.2
FXN-203ENST00000396366 ST8SIA1Q92185 356 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 S100PBPQ96BU1 408 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 SMR3AQ99954 134 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 MANSC1Q9H8J5 431 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 SLC6A13Q9NSD5 602 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 ACER3Q9NUN7 267 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 GPR52Q9Y2T5 361 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 DSCAMO60469 2012 aa16.27■□□□□ 0.2
FXN-203ENST00000396366 TRPC5OSA6NMA1 111 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 ADAP00813 363 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 CHRM4P08173 479 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 GUSBP08236 651 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 PGCP20142 388 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 PSMB1P20618 241 aaKnown RBP16.26■□□□□ 0.19
FXN-203ENST00000396366 KCNJ10P78508 379 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 BEND6Q5SZJ8 279 aaPredicted RBP16.26■□□□□ 0.19
FXN-203ENST00000396366 CNOT9Q92600 299 aaKnown RBP16.26■□□□□ 0.19
FXN-203ENST00000396366 TLCD1Q96CP7 247 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 PLPPR2Q96GM1 343 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 ZNF300Q96RE9 604 aaPredicted RBP16.26■□□□□ 0.19
FXN-203ENST00000396366 PSD2Q9BQI7 771 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 TMBIM4Q9HC24 238 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 CTPS2Q9NRF8 586 aa16.26■□□□□ 0.19
FXN-203ENST00000396366 POLE3Q9NRF9 147 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms