RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 SIRT6Q8N6T7 355 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 NR4A3Q92570 626 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 MSANTD3Q96H12 275 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 ISG20L2Q9H9L3 353 aaKnown RBP16.5■□□□□ 0.23
SREBF1-204ENST00000395756 STUB1Q9UNE7 303 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 CLDN16Q9Y5I7 305 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 RP1P56715 2156 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 LMO7DNF2Z398 122 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 TSPAN9O75954 239 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 NSA2O95478 260 aaKnown RBP16.5■□□□□ 0.23
SREBF1-204ENST00000395756 PPP1R3DO95685 299 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 MLLT11Q13015 90 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-204ENST00000395756 ZCCHC12Q6PEW1 402 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 KLBQ86Z14 1044 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 MED30Q96HR3 178 aa16.5■□□□□ 0.23
SREBF1-204ENST00000395756 TAF4O00268 1085 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 CSTAP01040 98 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 PAICSP22234 425 aaKnown RBP16.49■□□□□ 0.23
SREBF1-204ENST00000395756 SLC1A3P43003 542 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 C14orf28Q4W4Y0 310 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 ZNF595Q8IYB9 648 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 POC5Q8NA72 575 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 SENP5Q96HI0 755 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-204ENST00000395756 DCLRE1CQ96SD1 692 aaKnown RBP16.49■□□□□ 0.23
SREBF1-204ENST00000395756 TXNL4BQ9NX01 149 aaKnown RBP16.49■□□□□ 0.23
SREBF1-204ENST00000395756 RPS6KB2Q9UBS0 482 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 CFL2Q9Y281 166 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 SPEF1Q9Y4P9 236 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 C17orf51A8MQB3 221 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 SDC2P34741 201 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 SKP1P63208 163 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 POMZP3Q6PJE2 187 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 OR10H4Q8NGA5 316 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 SPRYD4Q8WW59 207 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-204ENST00000395756 RFKQ969G6 155 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 SYNDIG1Q9H7V2 258 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 PRDM6Q9NQX0 595 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 DNAJB12Q9NXW2 375 aaKnown RBP16.49■□□□□ 0.23
SREBF1-204ENST00000395756 TNFRSF10DQ9UBN6 386 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 SEC14L4Q9UDX3 406 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 ZNF223Q9UK11 482 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-204ENST00000395756 LRP4O75096 1905 aa16.49■□□□□ 0.23
SREBF1-204ENST00000395756 PCP4L1A6NKN8 68 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 KDM4EB2RXH2 506 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-204ENST00000395756 HPGDP15428 266 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 GPR3P46089 330 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 NXPH1P58417 271 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 SPANXN2Q5MJ10 180 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 C19orf48Q6RUI8 117 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 KIRREL2Q6UWL6 708 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 TMEM151BQ8IW70 566 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 BCORP1Q8N888 145 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 ZDHHC12Q96GR4 267 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 IRF2BPLQ9H1B7 796 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 CUTCQ9NTM9 273 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 NDUFB11Q9NX14 153 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 TLCD2A6NGC4 264 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 MTRF1O75570 445 aaKnown RBP16.48■□□□□ 0.23
SREBF1-204ENST00000395756 DRD5P21918 477 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 ACAA2P42765 397 aaKnown RBP16.48■□□□□ 0.23
SREBF1-204ENST00000395756 HCCSP53701 268 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 STEAP3Q658P3 488 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 B3GNT3Q9Y2A9 372 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 C12orf71A8MTZ7 269 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 DVL2O14641 736 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 MAGEB4O15481 346 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-204ENST00000395756 PRAMEF2O60811 474 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 PIAS2O75928 621 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 LYPD3O95274 346 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 LIMK1P53667 647 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 FOXK2Q01167 660 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 HNRNPA0Q13151 305 aaKnown RBP16.48■□□□□ 0.23
SREBF1-204ENST00000395756 C3orf38Q5JPI3 329 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 SLC25A30Q5SVS4 291 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 MED25Q71SY5 747 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 SLC25A45Q8N413 288 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 OR6C4Q8NGE1 309 aa16.48■□□□□ 0.23
SREBF1-204ENST00000395756 C2orf92A0A1B0GVN3 265 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 CD8B2A6NJW9 211 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 AK1P00568 194 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 HMGN1P05114 100 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 CD8BP10966 210 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 FOLR1P15328 257 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 TBXA2RP21731 343 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 NUDT1P36639 197 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 CFHR1Q03591 330 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 ZMAT1Q5H9K5 638 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 LAX1Q8IWV1 398 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 OR8H2Q8N162 312 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 PTP4A1Q93096 173 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 PRDM9Q9NQV7 894 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 A0A0B4J2E0 115 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 A0A1B0GX12 115 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 LOC110117498-PIK3R3F6TDL0 507 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 BCAT2O15382 392 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-204ENST00000395756 NCR1O76036 304 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 GABRA4P48169 554 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 FABP5Q01469 135 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 GRM7Q14831 915 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 OXA1LQ15070 435 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms