RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 DPPA4Q7L190 304 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 SLC44A3Q8N4M1 653 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 ESX1Q8N693 406 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 FBXO34Q9NWN3 711 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 MAN2B1O00754 1011 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 LPLP06858 475 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 IL9P15248 144 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 CTRB1P17538 263 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 CFL1P23528 166 aaKnown RBP13.28□□□□□ -0.28
CLIP2-203ENST00000395060 ADH7P40394 386 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 FNTBP49356 437 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 FXYD6P3P58550 94 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 RPE65Q16518 533 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 CTRB2Q6GPI1 263 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 KLHDC8AQ8IYD2 350 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 CMTM4Q8IZR5 234 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 ACOT4Q8N9L9 421 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 RELL2Q8NC24 303 aaPredicted RBP13.28□□□□□ -0.28
CLIP2-203ENST00000395060 SMPDL3BQ92485 455 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 OR1F2PQ96R84 312 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 TEAD3Q99594 435 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 SYNPO2LQ9H987 977 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 C12orf10Q9HB07 376 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 EXOGQ9Y2C4 368 aaKnown RBP13.28□□□□□ -0.28
CLIP2-203ENST00000395060 TRBV23OR9-2A0A075B6M9 112 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 hCG_1807616A0A1W2PRN6 198 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 PPM1BO75688 479 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 PSMA6P60900 246 aaKnown RBP13.27□□□□□ -0.28
CLIP2-203ENST00000395060 HTR4Q13639 388 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 LCTLQ6UWM7 567 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 GPALPP1Q8IXQ4 340 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 OR11G2Q8NGC1 345 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 DNAJA3Q96EY1 480 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 SLC35A4Q96G79 324 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 KLHL15Q96M94 604 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 OR52A5Q9H2C5 316 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 PPA2Q9H2U2 334 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.28
CLIP2-203ENST00000395060 ADAP2Q9NPF8 381 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 SPHK2Q9NRA0 654 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 SAGE1Q9NXZ1 904 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 GNG8Q9UK08 70 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 PLEKHM1Q9Y4G2 1056 aa13.27□□□□□ -0.28
CLIP2-203ENST00000395060 A0A0G2JPF8 293 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 A0A1B0GVT2 93 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 ZNF860A6NHJ4 632 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 HNRNPCL3B7ZW38 293 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 PEX14O75381 377 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 SPDEFO95238 335 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 HNRNPCL4P0DMR1 293 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 NAGAP17050 411 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 FPR3P25089 353 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 DCTDP32321 178 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 STAT5AP42229 794 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 STPG1Q5TH74 334 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 OTPQ5XKR4 325 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 FIGNL1Q6PIW4 674 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 ATRAIDQ6UW56 229 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 DCUN1D3Q8IWE4 304 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 SDR9C7Q8NEX9 313 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 OR8K3Q8NH51 312 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 LRIG1Q96JA1 1093 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 CD180Q99467 661 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 ARL6Q9H0F7 186 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 POT1Q9NUX5 634 aa13.27□□□□□ -0.29
CLIP2-203ENST00000395060 SIDT1Q9NXL6 827 aaKnown RBP13.27□□□□□ -0.29
CLIP2-203ENST00000395060 ZNF346Q9UL40 294 aaKnown RBP13.27□□□□□ -0.29
CLIP2-203ENST00000395060 DOCK9Q9BZ29 2069 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 ZNF106Q9H2Y7 1883 aaKnown RBP13.26□□□□□ -0.29
CLIP2-203ENST00000395060 LRIT2A6NDA9 550 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 UNC119BA6NIH7 251 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 FLRT2O43155 660 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 RLN1P04808 185 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 BCL6P41182 706 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 CSNK1G2P78368 415 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 BTN2A1Q7KYR7 527 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 FCRLAQ7L513 359 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 LINC00471Q8N535 108 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 KREMEN2Q8NCW0 462 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 TOR1AIP2Q8NFQ8 470 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 OR4K13Q8NH42 304 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 ZCCHC10Q8TBK6 192 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 CNOT9Q92600 299 aaKnown RBP13.26□□□□□ -0.29
CLIP2-203ENST00000395060 TOE1Q96GM8 510 aaKnown RBP13.26□□□□□ -0.29
CLIP2-203ENST00000395060 MRGPRX3Q96LB0 322 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 ACSS1Q9NUB1 689 aaPredicted RBP13.26□□□□□ -0.29
CLIP2-203ENST00000395060 MARK1Q9P0L2 795 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 WDR45Q9Y484 360 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 KCNMB2Q9Y691 235 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 IGKV1-8A0A0C4DH67 115 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 PEX12O00623 359 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 RPP14O95059 124 aaKnown RBP13.26□□□□□ -0.29
CLIP2-203ENST00000395060 GNRH1P01148 92 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 PTBP1P26599 531 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLIP2-203ENST00000395060 RPS15P62841 145 aaKnown RBP13.26□□□□□ -0.29
CLIP2-203ENST00000395060 MAPK14Q16539 360 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 PUS10Q3MIT2 529 aaKnown RBP13.26□□□□□ -0.29
CLIP2-203ENST00000395060 MBOAT2Q6ZWT7 520 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 DNAAF1Q8NEP3 725 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 NARS2Q96I59 477 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms