RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ZNF525Q8N782 197 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 ZNF433Q8N7K0 673 aaPredicted RBP18.63■□□□□ 0.57
TRAF4-203ENST00000394925 TOR1AIP2Q8NFQ8 470 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 OR7A2PQ8NGA2 310 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 OR5W2Q8NH69 310 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 DHRS9Q9BPW9 319 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 C12orf65Q9H3J6 166 aaKnown RBP18.63■□□□□ 0.57
TRAF4-203ENST00000394925 HEATR1Q9H583 2144 aaKnown RBP18.63■□□□□ 0.57
TRAF4-203ENST00000394925 MANSC1Q9H8J5 431 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 FAF1Q9UNN5 650 aaPredicted RBP18.63■□□□□ 0.57
TRAF4-203ENST00000394925 TMED5Q9Y3A6 229 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 ANK2Q01484 3957 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 GOLGA8QA0A0J9YX86 632 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 GOLGA8OA6NCC3 632 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 ELOA3DA6NLF2 546 aaPredicted RBP18.62■□□□□ 0.57
TRAF4-203ENST00000394925 GOLGA8NF8WBI6 632 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 LSM1O15116 133 aaKnown RBP18.62■□□□□ 0.57
TRAF4-203ENST00000394925 ZNF264O43296 627 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 RAD51DO75771 328 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 IGHV3-9P01782 118 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 BCKDHAP12694 445 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 CPA3P15088 417 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 ZNF83P51522 516 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 SPOCK1Q08629 439 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 KRTAP24-1Q3LI83 254 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 ELOA3BQ3SY89 546 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 C3orf33Q6P1S2 294 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 TMEM108Q6UXF1 575 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 FBXL14Q8N1E6 418 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 UBE2J2Q8N2K1 259 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 MUC15Q8N387 334 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 ELOA3Q8NG57 546 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 OR52N5Q8NH56 324 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 ARL8AQ96BM9 186 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 QRSL1Q9H0R6 528 aaKnown RBP18.62■□□□□ 0.57
TRAF4-203ENST00000394925 ATP6V1HQ9UI12 483 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 MGAT4BQ9UQ53 548 aa18.62■□□□□ 0.57
TRAF4-203ENST00000394925 MALRD1Q5VYJ5 2156 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 CIB4A0PJX0 185 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 ESPNB1AK53 854 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 NPIPB9F8W1W9 429 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 EIF4E2O60573 245 aaKnown RBP18.61■□□□□ 0.57
TRAF4-203ENST00000394925 C8BP07358 591 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 LAMP1P11279 417 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 UBL4AP11441 157 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 SLC25A16P16260 332 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 DDX5P17844 614 aaKnown RBP18.61■□□□□ 0.57
TRAF4-203ENST00000394925 HPCAL1P37235 193 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 FABP6P51161 128 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 CHRNEQ04844 493 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 CBFBQ13951 182 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 SPDYE7PQ495Y7 208 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 TIGD2Q4W5G0 525 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 LIPMQ5VYY2 423 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 MNS1Q8NEH6 495 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 OR56A1Q8NGH5 318 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 C16orf45Q96MC5 204 aaPredicted RBP18.61■□□□□ 0.57
TRAF4-203ENST00000394925 GPATCH2Q9NW75 528 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 TMEM160Q9NX00 188 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 DNAJC15Q9Y5T4 150 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 SVEP1Q4LDE5 3571 aa18.61■□□□□ 0.57
TRAF4-203ENST00000394925 A0A1W2PR80 420 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 CCT8L1PA6NM43 557 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 SCAMP2O15127 329 aaKnown RBP18.6■□□□□ 0.57
TRAF4-203ENST00000394925 CYP7B1O75881 506 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 CHEK2O96017 543 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 DHRS4L1P0CG22 281 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 PTAFRP25105 342 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 CD40P25942 277 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 CCT5P48643 541 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 DIO1P49895 249 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 PDZK1Q5T2W1 519 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 FBXW9Q5XUX1 488 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 CYB5R2Q6BCY4 276 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 KLHL17Q6TDP4 642 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 B3GLCTQ6Y288 498 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 RNF165Q6ZSG1 346 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 DDIASQ8IXT1 998 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 OR5P2Q8WZ92 322 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 FAM168AQ92567 244 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 THUMPD3Q9BV44 507 aaKnown RBP18.6■□□□□ 0.57
TRAF4-203ENST00000394925 SHARPINQ9H0F6 387 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 LPAR3Q9UBY5 353 aa18.6■□□□□ 0.57
TRAF4-203ENST00000394925 SULT2B1O00204 365 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 ETV2O00321 342 aaPredicted RBP18.59■□□□□ 0.57
TRAF4-203ENST00000394925 KRT16P08779 473 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 ZNF16P17020 682 aaPredicted RBP18.59■□□□□ 0.57
TRAF4-203ENST00000394925 KANK2Q63ZY3 851 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 TMPPEQ6ZT21 453 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 C10orf107Q8IVU9 208 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 OR7D2Q96RA2 312 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 AMBRA1Q9C0C7 1298 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 SERINC1Q9NRX5 453 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 EMC3Q9P0I2 261 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 GIMAP2Q9UG22 337 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 SLC25A15Q9Y619 301 aa18.59■□□□□ 0.57
TRAF4-203ENST00000394925 SERINC4A6NH21 518 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 TMEM114B3SHH9 223 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 M0R1B8 84 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 C6orf47O95873 294 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms