RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ZBP1Q9H171 429 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 THSD1Q9NS62 852 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 TBCCD1Q9NVR7 557 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 B4DXG7 233 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 TNFSF12O43508 249 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 FOXD2O60548 495 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-203ENST00000394872 BMXP51813 675 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 EFNA3P52797 238 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 KIAA1211LQ6NV74 962 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 MKXQ8IYA7 352 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 ADAMTS19Q8TE59 1207 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 DCUN1D4Q92564 292 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 CTRCQ99895 268 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 MICU1Q9BPX6 476 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 DDX31Q9H8H2 851 aaKnown RBP9.72□□□□□ -0.85
COL4A6-203ENST00000394872 EVA1AQ9H8M9 152 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 NLKQ9UBE8 527 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF780AO75290 641 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-203ENST00000394872 MSL3P1P0C860 447 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 GPX3P22352 226 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 IVDP26440 423 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SLC5A2P31639 672 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 STT3AP46977 705 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 LUMP51884 338 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-203ENST00000394872 TNFRSF17Q02223 184 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 CCBE1Q6UXH8 406 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SLC16A14Q7RTX9 510 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 KCTD20Q7Z5Y7 419 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 LMNTD1Q8N9Z9 388 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 MRPL38Q96DV4 380 aaKnown RBP9.72□□□□□ -0.85
COL4A6-203ENST00000394872 C4orf36Q96KX1 117 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SLC6A18Q96N87 628 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SPIN2AQ99865 258 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SPIN2BQ9BPZ2 258 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 TSPAN10Q9H1Z9 355 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-203ENST00000394872 DCAF13Q9NV06 445 aaKnown RBP9.72□□□□□ -0.85
COL4A6-203ENST00000394872 WIF1Q9Y5W5 379 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SCN11AQ9UI33 1791 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 CD300LBA8K4G0 201 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 CYB5BO43169 146 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 BMP2P12643 396 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 AQP2P41181 271 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 HTR5AP47898 357 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 NOVP48745 357 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 TMEM176BQ3YBM2 270 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-203ENST00000394872 FAM57BQ71RH2 274 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 BPHLQ86WA6 291 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF775Q96BV0 537 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-203ENST00000394872 ZBED3Q96IU2 234 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-203ENST00000394872 AMDHD1Q96NU7 426 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 WDR83Q9BRX9 315 aaKnown RBP9.71□□□□□ -0.85
COL4A6-203ENST00000394872 VN1R3Q9BXE9 311 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 LRFN1Q9P244 771 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 NOSIPQ9Y314 301 aaKnown RBP9.71□□□□□ -0.85
COL4A6-203ENST00000394872 EMC9Q9Y3B6 208 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 KDM3BQ7LBC6 1761 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 ANKRD34BA5PLL1 514 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 MEIS3P1A6NDR6 274 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 TIMM8AO60220 97 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-203ENST00000394872 RAB3DO95716 219 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 ATP1B3P54709 279 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 HYAL4Q2M3T9 481 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 SLC22A6Q4U2R8 563 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 GAREM2Q75VX8 874 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 OR13J1Q8NGT2 312 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 SNAPC3Q92966 411 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF845Q96IR2 970 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-203ENST00000394872 SSX3Q99909 188 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 EDARQ9UNE0 448 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 D6RAR5 112 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 F10P00742 488 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 IFNA4P05014 189 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 HOXA9P31269 272 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 ETV4P43268 484 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 CLDN17P56750 224 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 TAS2R31P59538 309 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 RIPPLY1Q0D2K3 151 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 NIPAL3Q6P499 406 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 BIRC8Q96P09 236 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF587Q96SQ5 575 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-203ENST00000394872 SLC6A17Q9H1V8 727 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 OR52D1Q9H346 318 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 SLC6A20Q9NP91 592 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 TMEM100Q9NV29 134 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 VAPAQ9P0L0 249 aa9.71□□□□□ -0.85
COL4A6-203ENST00000394872 GFRA2O00451 464 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 SC5DO75845 299 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 TAS2R20P59543 309 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 DMWDQ09019 674 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 CDK5R2Q13319 367 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 PODNL1Q6PEZ8 512 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 ASCC1Q8N9N2 400 aaKnown RBP9.71□□□□□ -0.86
COL4A6-203ENST00000394872 OR11L1Q8NGX0 322 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 ADAMTS16Q8TE57 1224 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 HDAC8Q9BY41 377 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 TMEM181Q9P2C4 612 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 MED16Q9Y2X0 877 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 C17orf113A0A1B0GUU1 675 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms