RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ACOXLQ9NUZ1 547 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 C14orf105Q9NVL8 296 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 KLK11Q9UBX7 282 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 IER3IP1Q9Y5U9 82 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 GVINP1Q7Z2Y8 2422 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 COL4A4P53420 1690 aaPredicted RBP12.3□□□□□ -0.44
NFKB1-202ENST00000394820 EIF1AYO14602 144 aaKnown RBP12.3□□□□□ -0.44
NFKB1-202ENST00000394820 GTF2F2P13984 249 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 ENPP7Q6UWV6 458 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 NEURL3Q96EH8 262 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 SLC6A18Q96N87 628 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 AMDHD1Q96NU7 426 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 TNFRSF13CQ96RJ3 184 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 GAL3ST4Q96RP7 486 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 SRMSQ9H3Y6 488 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 SERGEFQ9UGK8 458 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 A0A1B0GVI7 797 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 SCO2O43819 266 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 KAT7O95251 611 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 FGF19O95750 216 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 SLC35G6P0C7Q6 338 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 EN2P19622 333 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ITGB7P26010 798 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 PSMD4P55036 377 aaKnown RBP12.29□□□□□ -0.44
NFKB1-202ENST00000394820 GMFBP60983 142 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 MINDY4Q4G0A6 757 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 DMRTC1Q5HYR2 192 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ADGRF3Q8IZF5 1079 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 RDH10Q8IZV5 341 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 NAXEQ8NCW5 288 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ZNF563Q8TA94 476 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ABHD4Q8TB40 342 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 SFXN2Q96NB2 322 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ATF6BQ99941 703 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ULBP3Q9BZM4 244 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 SYNDIG1Q9H7V2 258 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 GPN1Q9HCN4 374 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-202ENST00000394820 PHF11Q9UIL8 331 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 A4GNTQ9UNA3 340 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 A0A1B0GV50 99 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 A0A1W2PPL8 197 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 PEX12O00623 359 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 AIFM1O95831 613 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ECDO95905 644 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-202ENST00000394820 CISD3P0C7P0 127 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 M6PRP20645 277 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 CEBPGP53567 150 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 SNRPGP62308 76 aaKnown RBP12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ERVK-25P63136 954 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 TMEM240Q5SV17 173 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 OR6N2Q8NGY6 317 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 WFIKKN2Q8TEU8 576 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 PIGUQ9H490 435 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 GOSR2O14653 212 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 SOD1P00441 154 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 CPMP14384 443 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 CPEP16870 476 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 GABRB1P18505 474 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 TRHRP34981 398 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-202ENST00000394820 GDI2P50395 445 aaKnown RBP12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ERV3-1Q14264 604 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 FAM74A1Q5RGS3 127 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ARMC6Q6NXE6 501 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 SPERTQ8NA61 448 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ZNF511Q8NB15 262 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 RERGQ96A58 199 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-202ENST00000394820 TSSK2Q96PF2 358 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 ELL3Q9HB65 397 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-202ENST00000394820 RWDD3Q9Y3V2 267 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 CDH10Q9Y6N8 788 aa12.29□□□□□ -0.44
NFKB1-202ENST00000394820 IDSB3KWA1 339 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 CDK3Q00526 305 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 C3orf38Q5JPI3 329 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 ZNF322Q6U7Q0 402 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-202ENST00000394820 JAGN1Q8N5M9 183 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 FRMD1Q8N878 549 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 OR4Q3Q8NH05 313 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 SMARCD2Q92925 531 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 RBM18Q96H35 190 aaKnown RBP12.28□□□□□ -0.44
NFKB1-202ENST00000394820 LRIG1Q96JA1 1093 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 PRSS16Q9NQE7 514 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 PHPT1Q9NRX4 125 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-202ENST00000394820 REV1Q9UBZ9 1251 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 ZNF346Q9UL40 294 aaKnown RBP12.28□□□□□ -0.44
NFKB1-202ENST00000394820 NOP16Q9Y3C1 178 aaKnown RBP12.28□□□□□ -0.44
NFKB1-202ENST00000394820 TPRP12270 2363 aaKnown RBP12.28□□□□□ -0.44
NFKB1-202ENST00000394820 DOCK9Q9BZ29 2069 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 TRAV18A0A075B6X5 111 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 TCRBV16S1A1N1A0A5B0 115 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 EMC8O43402 210 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 SLC43A1O75387 559 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 ARL6IP5O75915 188 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 RCBTB2O95199 551 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 MAKP20794 623 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 SFRP5Q5T4F7 317 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 ZCCHC12Q6PEW1 402 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 C3P1Q6ZMU1 363 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 FAM26EQ8N5C1 309 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 C17orf47Q8NEP4 570 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 OR5M3Q8NGP4 307 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms