RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 NSMAFQ92636 917 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 SLC35A4Q96G79 324 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.85□□□□□ -0.677e-8■■□□□ 14.3
UBE2D3-209ENST00000394804 MYOFQ9NZM1 2061 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 PAHP00439 452 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 MAP3K8P41279 467 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 OR3A3P47888 321 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 RFX2P48378 723 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 FAM78AQ5JUQ0 283 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 FAM69AQ5T7M9 428 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 METTL11BQ5VVY1 283 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 MTFR2Q6P444 385 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 FAM111BQ6SJ93 734 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 TSEN54Q7Z6J9 526 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 GLCCI1Q86VQ1 547 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 C12orf40Q86WS4 652 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 COMMD2Q86X83 199 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 KIF18BQ86Y91 864 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 POMGNT2Q8NAT1 580 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 OR56B4Q8NH76 319 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 TSACCQ96A04 125 aaPredicted RBP10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 GAL3ST4Q96RP7 486 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 GAL3ST1Q99999 423 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 SFXN1Q9H9B4 322 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 CD93Q9NPY3 652 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 RXFP3Q9NSD7 469 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 NAP1L6A6NFF2 107 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 PRAMEF25A6NGN4 478 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 MT-ND4P03905 459 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 GALEQ14376 348 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 EXOSC7Q15024 291 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 NIPAL3Q6P499 406 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 LRRN1Q6UXK5 716 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 GPR135Q8IZ08 494 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 AMER3Q8N944 861 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 OR6N2Q8NGY6 317 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 CCDC107Q8WV48 283 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 THRSPQ92748 146 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 FGF13Q92913 245 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 RNF31Q96EP0 1072 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 MIXL1Q9H2W2 232 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 MBNL1Q9NR56 388 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 LSM2Q9Y333 95 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 NPFFR2Q9Y5X5 522 aa10.85□□□□□ -0.67
UBE2D3-209ENST00000394804 F5P12259 2224 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 SCDO00767 359 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ZNF780AO75290 641 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 TNFP01375 233 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ART1P52961 327 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 DUSP5Q16690 384 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 KXD1Q9BQD3 176 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 RSPH9Q9H1X1 276 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 GRHPRQ9UBQ7 328 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 H3BSH0 61 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 SGK494L7N484 410 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 LILRB3O75022 631 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 PAPLNO95428 1278 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 TYRP1P17643 537 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 AHCYP23526 432 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 DNASE1L1P49184 302 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 EIF2B5Q13144 721 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 MAPK14Q16539 360 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ODF4Q2M2E3 257 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ZNF628Q5EBL2 1059 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ZNF613Q6PF04 617 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ZNF793Q6ZN11 406 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 COMMD7Q86VX2 200 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 NLGN4YQ8NFZ3 816 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 OR4Q3Q8NH05 313 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 OR8K3Q8NH51 312 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 GIMAP1Q8WWP7 306 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ZNF764Q96H86 408 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 AHCYL2Q96HN2 611 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 EMC7Q9NPA0 242 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ATP13A2Q9NQ11 1180 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 IL20Q9NYY1 176 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 KCNE3Q9Y6H6 103 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 GPR75O95800 540 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 SBK2P0C263 348 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 PSMB10P40306 273 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 PAQR7Q86WK9 346 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 TRMT61AQ96FX7 289 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 TEAD3Q99594 435 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ARHGDIGQ99819 225 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ACTR10Q9NZ32 417 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ZC3H12DA2A288 527 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 GATBO75879 557 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 THBS1P07996 1170 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 RNH1P13489 461 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 COL28A1Q2UY09 1125 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 SLC25A30Q5SVS4 291 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 ZC3H14Q6PJT7 736 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 SIAH3Q8IW03 269 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 GATSQ8NAP1 163 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 POGLUT1Q8NBL1 392 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 DIO2Q92813 273 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 SDF2Q99470 211 aa10.84□□□□□ -0.67
UBE2D3-209ENST00000394804 SLC25A18Q9H1K4 315 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms