RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MXRA5Q9NR99 2828 aa15.49■□□□□ 0.07
SNRPA1-202ENST00000394082 CHD3Q12873 2000 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 IGKV3D-15A0A087WSY6 115 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 NPIPA5A0A0B4J1W7 369 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 RNF223E7ERA6 249 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 NPIPA7E9PJI5 369 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 SMAD9O15198 467 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 STX11O75558 287 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 NPIPA8P0DM63 369 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 FKBP2P26885 142 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 CSNK2A1P68400 391 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 HBA1P69905 142 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 MAD2L1Q13257 205 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 SKP2Q13309 424 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 PPA1Q15181 289 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 FNDC5Q8NAU1 212 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 LRRN4CLQ8ND94 238 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 MIPOL1Q8TD10 442 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 MUCL1Q96DR8 90 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 C3orf30Q96M34 536 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 TRAF4Q9BUZ4 470 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 DUSP26Q9BV47 211 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 SERINC1Q9NRX5 453 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 ASIC5Q9NY37 505 aa15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 NUP214P35658 2090 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-202ENST00000394082 A0A1W2PNR3 127 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 SLU7O95391 586 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 AGR2O95994 175 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 CLDN8P56748 225 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 NRF1Q16656 503 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 NDUFAF6Q330K2 333 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 ARHGAP11BQ3KRB8 267 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 TIGD2Q4W5G0 525 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 PDZK1Q5T2W1 519 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 ALKBH2Q6NS38 261 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 TMPPEQ6ZT21 453 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 GALNT5Q7Z7M9 940 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 KRTCAP2Q8N6L1 136 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 ZNF614Q8N883 585 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 KBTBD8Q8NFY9 601 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 ZNF350Q9GZX5 532 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 POLE3Q9NRF9 147 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 ACER3Q9NUN7 267 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 CISD1Q9NZ45 108 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 GIMAP2Q9UG22 337 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 CADP27708 2225 aa15.47■□□□□ 0.07
SNRPA1-202ENST00000394082 OR5H1A6NKK0 313 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 SHISA9B4DS77 424 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 RNASET2O00584 256 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 CFLARO15519 480 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 DNPH1O43598 174 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 CD5LO43866 347 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 UGT2B17O75795 530 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 LYZL6O75951 148 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 H6PDO95479 791 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 CD8AP01732 235 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 IGHV4-39P01824 125 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 TP53P04637 393 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 NUDT17P0C025 328 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 GGT1P19440 569 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 PGCP20142 388 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 MATN1P21941 496 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 APOBEC1P41238 236 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 DIO1P49895 249 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 SESN3P58005 492 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 EMX2Q04743 252 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 SYT14P1Q58G82 188 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 C1QTNF12Q5T7M4 302 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 ABLIM2Q6H8Q1 611 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 EIF3MQ7L2H7 374 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 C6orf120Q7Z4R8 191 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 MTDHQ86UE4 582 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 TMCO5AQ8N6Q1 288 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 FAM71CQ8NEG0 241 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 ATP6V1C2Q8NEY4 427 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 OR8J2Q8NGG1 315 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 OR5D16Q8NGK9 328 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 NEUROG1Q92886 237 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 OR5B2Q96R09 309 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 C1orf50Q9BV19 199 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 THUMPD3Q9BV44 507 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 MECRQ9BV79 373 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 ALG2Q9H553 416 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 NOP53Q9NZM5 478 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 EMC3Q9P0I2 261 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 LGALS13Q9UHV8 139 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 PRSS50Q9UI38 385 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 ZDHHC2Q9UIJ5 367 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 KCNE5Q9UJ90 142 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 MGAT4BQ9UQ53 548 aa15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 SPIN1Q9Y657 262 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 SONP18583 2426 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-202ENST00000394082 ABCA1O95477 2261 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 IGHV3-15A0A0B4J1V0 119 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 ANKRD28O15084 1053 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 FCMRO60667 390 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 CSTAP01040 98 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 IGHV1-2P23083 117 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 ARRB2P32121 409 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 ACVR1BP36896 505 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms