RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 SMIM11AP58511 58 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 EIF2B5Q13144 721 aaKnown RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 TRAM2Q15035 370 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 MRPL2Q5T653 305 aaKnown RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 OR7G1Q8NGA0 311 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 OR8K3Q8NH51 312 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 MSANTD3Q96H12 275 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 SPATA5L1Q9BVQ7 753 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 IFT27Q9BW83 186 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 EIF3KQ9UBQ5 218 aaKnown RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 MGAT4AQ9UM21 535 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 MPDZO75970 2070 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 E9PI62 339 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 MT-ND4P03905 459 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 ZNF81P51508 661 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 EEF1A1P68104 462 aaKnown RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 MAT1AQ00266 395 aaKnown RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 TSPAN31Q12999 210 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 MLLT11Q13015 90 aaPredicted RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 SUZ12Q15022 739 aaKnown RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 AVL9Q8NBF6 648 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 ZFYVE21Q9BQ24 234 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 DIMT1Q9UNQ2 313 aaKnown RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 SPEF1Q9Y4P9 236 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 CYR61O00622 381 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 TSPAN4O14817 238 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 SNRPBP14678 240 aaKnown RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 ARSBP15848 533 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 SLC1A3P43003 542 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 FZD5Q13467 585 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 FAM53BQ14153 422 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 NDUFAF6Q330K2 333 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 POMZP3Q6PJE2 187 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 XKRXQ6PP77 449 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 CEACAM19Q7Z692 300 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 SIRT6Q8N6T7 355 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 TMEM99Q8N816 258 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 GNPDA2Q8TDQ7 276 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 SENP5Q96HI0 755 aaPredicted RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 MAP6Q96JE9 813 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 PTCHD1Q96NR3 888 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 SERINC2Q96SA4 455 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 TPSD1Q9BZJ3 242 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 ZNF576Q9H609 170 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 CACYBPQ9HB71 228 aaKnown RBP12.69□□□□□ -0.38
CCDC142-202ENST00000393965 IL21RQ9HBE5 538 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 GTF2A1LQ9UNN4 478 aa12.69□□□□□ -0.38
CCDC142-202ENST00000393965 A0A1B0GVT2 93 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 SURF4O15260 269 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 AKAP8O43823 692 aaKnown RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 SEMA4FO95754 770 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 GIFP27352 417 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 PSMB10P40306 273 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 MGAT2Q10469 447 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 ST3GAL3Q11203 375 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 KIR2DS3Q14952 304 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 DCST2Q5T1A1 773 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 THSD4Q6ZMP0 1018 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 CDH24Q86UP0 819 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 ZNF431Q8TF32 576 aaPredicted RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 GDF15Q99988 308 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 GSDMCQ9BYG8 508 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 HINT3Q9NQE9 182 aaKnown RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 NLGN3Q9NZ94 848 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 TP53BP1Q12888 1972 aaPredicted RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 FREM2Q5SZK8 3169 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 LRRN3E7EW58 273 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 TNFSF14O43557 240 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 KCNJ13O60928 360 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 APBB3O95704 486 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 PROS1P07225 676 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 MEDAGQ5VYS4 303 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 SLC36A4Q6YBV0 504 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 OR4M1Q8NGD0 313 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 AP3S1Q92572 193 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 LRRN3Q9H3W5 708 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 HCN3Q9P1Z3 774 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 SIRT4Q9Y6E7 314 aaPredicted RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 B4DGG1 531 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 KLF4O43474 513 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 ORC5O43913 435 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 RPP14O95059 124 aaKnown RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 PRKAR1BP31321 381 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 MAZP56270 477 aaKnown RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 PRICKLE4Q2TBC4 344 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 ARHGAP11BQ3KRB8 267 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 TP53I3Q53FA7 332 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 TAF8Q7Z7C8 310 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 SLC38A6Q8IZM9 456 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 CA13Q8N1Q1 262 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 LRRC17Q8N6Y2 441 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 BAHD1Q8TBE0 780 aaPredicted RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 TOE1Q96GM8 510 aaKnown RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 SNX18Q96RF0 628 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 ZNF649Q9BS31 505 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 FLVCR2Q9UPI3 526 aa12.68□□□□□ -0.38
CCDC142-202ENST00000393965 SF3B6Q9Y3B4 125 aaKnown RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 AK6Q9Y3D8 172 aaKnown RBP12.68□□□□□ -0.38
CCDC142-202ENST00000393965 IGKV1D-16P01601 117 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms