RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 OR5W2Q8NH69 310 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 FAM168AQ92567 244 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 ZNF775Q96BV0 537 aaPredicted RBP13.53□□□□□ -0.24
CHMP3-202ENST00000393773 MTERF3Q96E29 417 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 AMBRA1Q9C0C7 1298 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 HOXD1Q9GZZ0 328 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 GPATCH2Q9NW75 528 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 PSMC3IPQ9P2W1 217 aaPredicted RBP13.53□□□□□ -0.24
CHMP3-202ENST00000393773 DTNAQ9Y4J8 743 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 SLC25A15Q9Y619 301 aa13.53□□□□□ -0.24
CHMP3-202ENST00000393773 IGKV3D-15A0A087WSY6 115 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 H3BNH8 94 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 SCAMP2O15127 329 aaKnown RBP13.52□□□□□ -0.25
CHMP3-202ENST00000393773 PLIN3O60664 434 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 DNAJA2O60884 412 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 DHRS4L1P0CG22 281 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 UBL4AP11441 157 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 PTAFRP25105 342 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 CD40P25942 277 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 ATP12AP54707 1039 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 SRSF2Q01130 221 aaKnown RBP13.52□□□□□ -0.25
CHMP3-202ENST00000393773 SKP2Q13309 424 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 CFAP157Q5JU67 520 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 SLC22A25Q6T423 547 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 ARIH2OSQ8N7S6 290 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 TOR1AIP2Q8NFQ8 470 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 OR52N5Q8NH56 324 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 PSMA8Q8TAA3 256 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 CHMP6Q96FZ7 201 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 OR5B2Q96R09 309 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 ACTRT3Q9BYD9 372 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 SHARPINQ9H0F6 387 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 QRSL1Q9H0R6 528 aaKnown RBP13.52□□□□□ -0.25
CHMP3-202ENST00000393773 DCDC2Q9UHG0 476 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 ATP6V1HQ9UI12 483 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 MGAT4BQ9UQ53 548 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 TMED5Q9Y3A6 229 aa13.52□□□□□ -0.25
CHMP3-202ENST00000393773 CENPVL1A0A0U1RR11 272 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 A0A1W2PPM1 405 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 ZNF716A6NP11 495 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 AZIN1O14977 448 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 ZNF264O43296 627 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 EIF4E2O60573 245 aaKnown RBP13.51□□□□□ -0.25
CHMP3-202ENST00000393773 IGHV3-9P01782 118 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 CSF3P09919 207 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 BCKDHAP12694 445 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 ASMTP46597 345 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 DIO1P49895 249 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 ZNF83P51522 516 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 CCR4P51679 360 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 TP53BP2Q13625 1128 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 CBFBQ13951 182 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 RAB35Q15286 201 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 TIGD2Q4W5G0 525 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 LIPMQ5VYY2 423 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 FBXW9Q5XUX1 488 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 KANK2Q63ZY3 851 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 CYB5R2Q6BCY4 276 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 IL17RELQ6ZVW7 336 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 TRMT10CQ7L0Y3 403 aaKnown RBP13.51□□□□□ -0.25
CHMP3-202ENST00000393773 ZNF100Q8IYN0 542 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 FBXL14Q8N1E6 418 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 ZNF614Q8N883 585 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 OR7A2PQ8NGA2 310 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 OR56A1Q8NGH5 318 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 RFWD2Q8NHY2 731 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 PROX1Q92786 737 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 OXSMQ9NWU1 459 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 EMC3Q9P0I2 261 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 MALT1Q9UDY8 824 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 TBK1Q9UHD2 729 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 POU2F3Q9UKI9 436 aa13.51□□□□□ -0.25
CHMP3-202ENST00000393773 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHMP3-202ENST00000393773 A0A1W2PR80 420 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 GTPBP1O00178 669 aaKnown RBP13.5□□□□□ -0.25
CHMP3-202ENST00000393773 LY6HO94772 140 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 LINC00032P0C843 101 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 LAMP1P11279 417 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 HPCAL1P37235 193 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 FOXG1P55316 489 aaPredicted RBP13.5□□□□□ -0.25
CHMP3-202ENST00000393773 PDK3Q15120 406 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 CCDC153Q494R4 210 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 GALNTL6Q49A17 601 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 SYT14P1Q58G82 188 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 PDZK1Q5T2W1 519 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 ZNF544Q6NX49 715 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 KLHL17Q6TDP4 642 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 R3HCC1LQ7Z5L2 792 aaKnown RBP13.5□□□□□ -0.25
CHMP3-202ENST00000393773 SFXN5Q8TD22 340 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 ADAMTS15Q8TE58 950 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 ST8SIA1Q92185 356 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 INPP5KQ9BT40 448 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 C12orf65Q9H3J6 166 aaKnown RBP13.5□□□□□ -0.25
CHMP3-202ENST00000393773 SERHL2Q9H4I8 314 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 KCNE5Q9UJ90 142 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 FIS1Q9Y3D6 152 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 DNAJC15Q9Y5T4 150 aa13.5□□□□□ -0.25
CHMP3-202ENST00000393773 SLC35F4A4IF30 521 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 VWC2LB2RUY7 222 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms