RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 ZNF559Q9BR84 538 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 CENPOQ9BU64 300 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 KRTAP9-2Q9BYQ4 174 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 NRSN2Q9GZP1 204 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 ARMC7Q9H6L4 198 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 MED20Q9H944 212 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 ZNF304Q9HCX3 659 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 APMAPQ9HDC9 416 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 FGF20Q9NP95 211 aaPredicted RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 PARD6AQ9NPB6 346 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 AKIP1Q9NQ31 210 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 HINT3Q9NQE9 182 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 PNO1Q9NRX1 252 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 FGF21Q9NSA1 209 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 IMPAD1Q9NX62 359 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 MMACHCQ9Y4U1 282 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 CDH10Q9Y6N8 788 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 RP1L1Q8IWN7 2480 aaPredicted RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 EML6Q6ZMW3 1958 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 IGHV3-20A0A0C4DH32 117 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 A0A1B0GX78 115 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 CPED1A4D0V7 1026 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 C4orf47A7E2U8 309 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 LRRN3E7EW58 273 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 KPNA4O00629 521 aaPredicted RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 CLDN4O14493 209 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 SOCS6O14544 535 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 TO15178 435 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 TSPAN2O60636 221 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 UTS2O95399 124 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 IL33O95760 270 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 RPLP0P05388 317 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 SP9P0CG40 484 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 LIMS3P0CW19 117 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 LIMS4P0CW20 117 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 ENDOUP21128 410 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 CSTF2P33240 577 aaKnown RBP eCLIP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 IDUAP35475 653 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 ADH7P40394 386 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 OPRL1P41146 370 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 SOX3P41225 446 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 CRYBB2P43320 205 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 PPICP45877 212 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 RFX3P48380 749 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 SMSP52788 366 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 IFITM3Q01628 133 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 EGR4Q05215 589 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 LTBQ06643 244 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 SERTAD2Q14140 314 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 EBPQ15125 230 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 NR0B2Q15466 257 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 ARMCX4Q5H9R4 360 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 FAM69BQ5VUD6 431 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 MEDAGQ5VYS4 303 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 VASNQ6EMK4 673 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 SLC27A4Q6P1M0 643 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 B3GLCTQ6Y288 498 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 C16orf47Q6ZP98 133 aaPredicted RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 SHISA6Q6ZSJ9 500 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 RANBP3LQ86VV4 465 aaPredicted RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 P2RY8Q86VZ1 359 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 C1orf210Q8IVY1 113 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 SLITRK4Q8IW52 837 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 PRR22Q8IZ63 422 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 RNF113BQ8IZP6 322 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 SLC15A4Q8N697 577 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 EID2Q8N6I1 236 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 PLPP5Q8NEB5 264 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 ANKK1Q8NFD2 765 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 TOR1AIP2Q8NFQ8 470 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 OR4D9Q8NGE8 314 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 FCGR1BQ92637 280 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 PIGKQ92643 395 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 C3orf49Q96BT1 292 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 TMEM80Q96HE8 168 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 CCDC74BQ96LY2 380 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 ZNF578Q96N58 590 aaPredicted RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 TNFRSF13CQ96RJ3 184 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 DCLRE1CQ96SD1 692 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 PRRX2Q99811 253 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 BCL7BQ9BQE9 202 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 TGIF2Q9GZN2 237 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 NXF2Q9GZY0 626 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 LRRN3Q9H3W5 708 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 GAREM1Q9H706 876 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 ZBTB20Q9HC78 741 aaPredicted RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 VCX3AQ9NNX9 186 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 TIMMDC1Q9NPL8 285 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 RXFP3Q9NSD7 469 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 OCIAD1Q9NX40 245 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 QPCTLQ9NXS2 382 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 KLHL28Q9NXS3 571 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 WARS2Q9UGM6 360 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 ENOPH1Q9UHY7 261 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 ICAM5Q9UMF0 924 aa3.46□□□□□ -1.86
CCDC110-202ENST00000393540 DIMT1Q9UNQ2 313 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 EXOGQ9Y2C4 368 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 SF3B6Q9Y3B4 125 aaKnown RBP3.46□□□□□ -1.86
CCDC110-202ENST00000393540 CENPEQ02224 2701 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms