RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 ZNF155Q12901 538 aaPredicted RBP6.92□□□□□ -1.3
CASP4-201ENST00000393150 TRMT12Q53H54 448 aaKnown RBP6.92□□□□□ -1.3
CASP4-201ENST00000393150 CT83Q5H943 113 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 OR7E24Q6IFN5 339 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 C11orf71Q6IPW1 123 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 CCDC137Q6PK04 289 aaKnown RBP6.92□□□□□ -1.3
CASP4-201ENST00000393150 KLHL24Q6TFL4 600 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 RBMS3Q6XE24 437 aaKnown RBP6.92□□□□□ -1.3
CASP4-201ENST00000393150 USP43Q70EL4 1123 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 FCRLAQ7L513 359 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 GGNQ86UU5 652 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 TUSC5Q8IXB3 177 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 GTPBP8Q8N3Z3 284 aaPredicted RBP6.92□□□□□ -1.3
CASP4-201ENST00000393150 ANKRD49Q8WVL7 239 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 MRPL24Q96A35 216 aaKnown RBP6.92□□□□□ -1.3
CASP4-201ENST00000393150 NXNL1Q96CM4 212 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 MTBPQ96DY7 904 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 FBXO17Q96EF6 278 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 KLHL15Q96M94 604 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 ZNF747Q9BV97 191 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 SUCNR1Q9BXA5 334 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 ZNF717Q9BY31 904 aaPredicted RBP6.92□□□□□ -1.3
CASP4-201ENST00000393150 IQCGQ9H095 443 aaKnown RBP6.92□□□□□ -1.3
CASP4-201ENST00000393150 RHOJQ9H4E5 214 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 ELOVL6Q9H5J4 265 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 DDX28Q9NUL7 540 aaKnown RBP6.92□□□□□ -1.3
CASP4-201ENST00000393150 ZNF639Q9UID6 485 aa6.92□□□□□ -1.3
CASP4-201ENST00000393150 PLCE1Q9P212 2302 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 IGHV4-61A0A0C4DH41 118 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 OR5H1A6NKK0 313 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 TTC36A6NLP5 189 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 PRAMEF4O60810 478 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 CLDN9O95484 217 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 OPN1LWP04000 364 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 CT45A8P0DMV1 189 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 CT45A9P0DMV2 189 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 SFTPDP35247 375 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 DVL1P1P54792 670 aaPredicted RBP6.91□□□□□ -1.3
CASP4-201ENST00000393150 GAS1P54826 345 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 ARL4CP56559 192 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 MRPS35P82673 323 aaKnown RBP6.91□□□□□ -1.3
CASP4-201ENST00000393150 TGFBR3Q03167 851 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 E2F2Q14209 437 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 VPS26BQ4G0F5 336 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 CT45A2Q5DJT8 189 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 C1QTNF12Q5T7M4 302 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 PRAMEF9Q5VWM5 478 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 RAD9BQ6WBX8 426 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 MARCH3Q86UD3 253 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 TRABD2AQ86V40 505 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 MISPQ8IVT2 679 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 RNF175Q8N4F7 328 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 STPG3Q8N7X2 389 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 OR52N5Q8NH56 324 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 ZNF675Q8TD23 568 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 ACTRT2Q8TDY3 377 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 ABHD3Q8WU67 409 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 SHCBP1LQ9BZQ2 653 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 ALG9Q9H6U8 611 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 TMEM185BQ9H7F4 350 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 EMC3Q9P0I2 261 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 USP22Q9UPT9 525 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 REXO2Q9Y3B8 237 aaKnown RBP6.91□□□□□ -1.3
CASP4-201ENST00000393150 SPEF1Q9Y4P9 236 aa6.91□□□□□ -1.3
CASP4-201ENST00000393150 YLPM1P49750 1951 aaKnown RBP6.91□□□□□ -1.3
CASP4-201ENST00000393150 VWC2LB2RUY7 222 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 FADS1O60427 444 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 ANGPTL1O95841 491 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 NUDT14O95848 222 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 MTHFD2P13995 350 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 ANPEPP15144 967 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 CD1DP15813 335 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 ENPP1P22413 925 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 PAX7P23759 505 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 ELK3P41970 407 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 OR3A2P47893 321 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 CCNG1P51959 295 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 CDH15P55291 814 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 TRA2BP62995 288 aaKnown RBP6.9□□□□□ -1.3
CASP4-201ENST00000393150 MGAT2Q10469 447 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 CSTF3Q12996 717 aaKnown RBP6.9□□□□□ -1.3
CASP4-201ENST00000393150 GTF2H2Q13888 395 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 FRG1Q14331 258 aaKnown RBP6.9□□□□□ -1.3
CASP4-201ENST00000393150 HEPACAMQ14CZ8 416 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 ZNF239Q16600 458 aaKnown RBP6.9□□□□□ -1.3
CASP4-201ENST00000393150 AWAT1Q58HT5 328 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 FRG2Q64ET8 278 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 GTF2H2CQ6P1K8 395 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 KLC3Q6P597 504 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 DEF8Q6ZN54 512 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 IKBIPQ70UQ0 350 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 NUFIP2Q7Z417 695 aaKnown RBP6.9□□□□□ -1.3
CASP4-201ENST00000393150 GALNT5Q7Z7M9 940 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 FAM9CQ8IZT9 166 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 BPIFB2Q8N4F0 458 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 RNF128Q8TEB7 428 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 NEU4Q8WWR8 484 aaPredicted RBP6.9□□□□□ -1.3
CASP4-201ENST00000393150 RNF145Q96MT1 663 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 VSTM2LQ96N03 204 aa6.9□□□□□ -1.3
CASP4-201ENST00000393150 FRG2BQ96QU4 278 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms