RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 GNGT2O14610 69 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 WBP4O75554 376 aaKnown RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 HRGP04196 525 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 RAB3BP20337 219 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ATP5A1P25705 553 aaKnown RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 C21orf33P30042 268 aaPredicted RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 RFC3P40938 356 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 GZMMP51124 257 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ARF3P61204 181 aaPredicted RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 CHAF1BQ13112 559 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ALKBH1Q13686 389 aaKnown RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 MICBQ29980 383 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 DEFB110Q30KQ9 67 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 TMEM35AQ53FP2 167 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ENPP6Q6UWR7 440 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 TMEM107Q6UX40 140 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 SHFQ7M4L6 423 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ZBED6CLQ96FA7 236 aaPredicted RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 SLC38A3Q99624 504 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 SEMA4CQ9C0C4 833 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 DNTTIP1Q9H147 329 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ANKRD19PQ9H560 264 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 MIEF1Q9NQG6 463 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 SLCO1C1Q9NYB5 712 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 PILRBQ9UKJ0 227 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 WDFY3Q8IZQ1 3526 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 HLA-DQB1P01920 261 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 ZNF888P0CJ79 500 aaPredicted RBP17.61■□□□□ 0.41
CCDC50-202ENST00000392456 ENGP17813 658 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 TGM4P49221 684 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 ERVK-25P63136 954 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 TP53BP2Q13625 1128 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 RBMS3Q6XE24 437 aaKnown RBP17.61■□□□□ 0.41
CCDC50-202ENST00000392456 MSANTD1Q6ZTZ1 278 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 C12orf45Q8N5I9 185 aaPredicted RBP17.61■□□□□ 0.41
CCDC50-202ENST00000392456 ZCCHC10Q8TBK6 192 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 PIGKQ92643 395 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 HGDQ93099 445 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 LRRC46Q96FV0 321 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 KCNC2Q96PR1 638 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 MAP3K3Q99759 626 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 BHLHE41Q9C0J9 482 aaPredicted RBP17.61■□□□□ 0.41
CCDC50-202ENST00000392456 FBXW2Q9UKT8 454 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 SLC6A5Q9Y345 797 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 INMT-MINDY4F8WBC2 141 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 CLIC1O00299 241 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 NMBP08949 121 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 GFERP55789 205 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 BTN3A2P78410 334 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 NLRC3Q7RTR2 1065 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 PRSS41Q7RTY9 318 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 ZER1Q7Z7L7 766 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 GALNT5Q7Z7M9 940 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 DMBX1Q8NFW5 382 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 OR11H7Q8NGC8 314 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 ART5Q96L15 291 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 ELF4Q99607 663 aaPredicted RBP17.61■□□□□ 0.41
CCDC50-202ENST00000392456 ZFYVE21Q9BQ24 234 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 RIBC2Q9H4K1 309 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 GORASP2Q9H8Y8 452 aa17.61■□□□□ 0.41
CCDC50-202ENST00000392456 ATXN7L1Q9ULK2 861 aaPredicted RBP17.61■□□□□ 0.41
CCDC50-202ENST00000392456 A0A1W2PR48 441 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 C1orf226A1L170 272 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 M0R233 179 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 RNASET2O00584 256 aaKnown RBP17.6■□□□□ 0.41
CCDC50-202ENST00000392456 PGRMC2O15173 223 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 COX5BP10606 129 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 IGFBP5P24593 272 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 C14orf28Q4W4Y0 310 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 KLHL22Q53GT1 634 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 C18orf63Q68DL7 685 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 C19orf48Q6RUI8 117 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 SLC35F3Q8IY50 421 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 AVL9Q8NBF6 648 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 OR2T12Q8NG77 320 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 OR4A15Q8NGL6 344 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 NKX6-2Q9C056 277 aaPredicted RBP17.6■□□□□ 0.41
CCDC50-202ENST00000392456 BTNL2Q9UIR0 455 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 ADAM29Q9UKF5 820 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 UTS2RQ9UKP6 389 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 SAMHD1Q9Y3Z3 626 aaKnown RBP17.6■□□□□ 0.41
CCDC50-202ENST00000392456 A0A1W2PS29 197 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 TO15178 435 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 ANXA3P12429 323 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 VAMP1P23763 118 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 FPR3P25089 353 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 PTGER1P34995 402 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 RPS19P39019 145 aaKnown RBP17.6■□□□□ 0.41
CCDC50-202ENST00000392456 PROX2Q3B8N5 592 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 MRM1Q6IN84 353 aaKnown RBP17.6■□□□□ 0.41
CCDC50-202ENST00000392456 ARMC6Q6NXE6 501 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 TRIM40Q6P9F5 258 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 KIAA1143Q96AT1 154 aaPredicted RBP17.6■□□□□ 0.41
CCDC50-202ENST00000392456 WDR77Q9BQA1 342 aaPredicted RBP17.6■□□□□ 0.41
CCDC50-202ENST00000392456 DPH2Q9BQC3 489 aaPredicted RBP17.6■□□□□ 0.41
CCDC50-202ENST00000392456 CRB3Q9BUF7 120 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 MED28Q9H204 178 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 CDCP1Q9H5V8 836 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 GPATCH2Q9NW75 528 aa17.6■□□□□ 0.41
CCDC50-202ENST00000392456 LRIT1Q9P2V4 623 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms