RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 RGNQ15493 299 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 TOMM34Q15785 309 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-203ENST00000391855 LIN52Q52LA3 116 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF563Q8TA94 476 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 FAM222BQ8WU58 562 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 AURKBQ96GD4 344 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-203ENST00000391855 REXO5Q96IC2 774 aaKnown RBP11.37□□□□□ -0.59
GGPS1-203ENST00000391855 GMPPAQ96IJ6 420 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-203ENST00000391855 NPAS1Q99742 590 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 KLHDC3Q9BQ90 382 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 RBM24Q9BX46 236 aaKnown RBP11.37□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF385DQ9H6B1 395 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 CCDC134Q9H6E4 229 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 ARMC7Q9H6L4 198 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 TMEM185BQ9H7F4 350 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 MCCC2Q9HCC0 563 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 LEF1Q9UJU2 399 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-203ENST00000391855 EMC9Q9Y3B6 208 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 PKDREJQ9NTG1 2253 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 INTS1Q8N201 2190 aaKnown RBP11.37□□□□□ -0.59
GGPS1-203ENST00000391855 A0A0G2JPF8 293 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 A8MXE2 369 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 HNRNPCL2B2RXH8 293 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 HNRNPCL3B7ZW38 293 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 C5orf58C9J3I9 102 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 TNFSF11O14788 317 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 ANGPT2O15123 496 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 HNRNPCL1O60812 293 aaKnown RBP11.36□□□□□ -0.59
GGPS1-203ENST00000391855 PLGP00747 810 aaPredicted RBP11.36□□□□□ -0.59
GGPS1-203ENST00000391855 THBS1P07996 1170 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 HNRNPCL4P0DMR1 293 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 CD8BP10966 210 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 SFTPDP35247 375 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 APOBEC1P41238 236 aaKnown RBP11.36□□□□□ -0.59
GGPS1-203ENST00000391855 KIR2DL3P43628 341 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 HTR3AP46098 478 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 AGFG1P52594 562 aaKnown RBP11.36□□□□□ -0.59
GGPS1-203ENST00000391855 CARD18P57730 90 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 SESN3P58005 492 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 LARS2Q15031 903 aaKnown RBP11.36□□□□□ -0.59
GGPS1-203ENST00000391855 GUSBP1Q15486 140 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF239Q16600 458 aaKnown RBP11.36□□□□□ -0.59
GGPS1-203ENST00000391855 RNF220Q5VTB9 566 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 PPP4R4Q6NUP7 873 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 PLEKHM3Q6ZWE6 761 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 FAM214BQ7L5A3 538 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 GRINAQ7Z429 371 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 CNEP1R1Q8N9A8 125 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 OR6K3Q8NGY3 331 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 BBS10Q8TAM1 723 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 SLC38A5Q8WUX1 472 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 OSTF1Q92882 214 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 THOC1Q96FV9 657 aaKnown RBP11.36□□□□□ -0.59
GGPS1-203ENST00000391855 TMEM19Q96HH6 336 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 TACO1Q9BSH4 297 aaKnown RBP11.36□□□□□ -0.59
GGPS1-203ENST00000391855 QRSL1Q9H0R6 528 aaKnown RBP11.36□□□□□ -0.59
GGPS1-203ENST00000391855 GP6Q9HCN6 339 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 BCL2L10Q9HD36 194 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 A4GALTQ9NPC4 353 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 FANCFQ9NPI8 374 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 SLC52A3Q9NQ40 469 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 DNAJB12Q9NXW2 375 aaKnown RBP11.36□□□□□ -0.59
GGPS1-203ENST00000391855 IFT52Q9Y366 437 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 NDUFAF1Q9Y375 327 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 CACNA1DQ01668 2161 aa11.36□□□□□ -0.59
GGPS1-203ENST00000391855 TRBV5-3A0A0A0MS03 114 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 EVPLLA8MZ36 301 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 SS18L1O75177 396 aaPredicted RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 AQP8O94778 261 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 IL11P20809 199 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 KIR2DL2P43627 348 aaPredicted RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 CLK1P49759 484 aaKnown RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 MAP2K6P52564 334 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 CTBP2P56545 445 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 MERTKQ12866 999 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 RNPS1Q15287 305 aaKnown RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 MAPK11Q15759 364 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 TMEM176BQ3YBM2 270 aaPredicted RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 PAGE3Q5JUK9 113 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 GCNT6Q5T4J0 391 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 PLXDC2Q6UX71 529 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 LUZP2Q86TE4 346 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 MED12LQ86YW9 2145 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 DPP10Q8N608 796 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 OR52P1PQ8NH57 321 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 RNF128Q8TEB7 428 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 CNOT9Q92600 299 aaKnown RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 SLC35B4Q969S0 331 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 ZG16BQ96DA0 208 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 STARD4Q96DR4 205 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 TMEM120AQ9BXJ8 343 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 COQ10BQ9H8M1 238 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 FGFR1OP2Q9NVK5 253 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 GALNT8Q9NY28 637 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 SLC25A37Q9NYZ2 338 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 PROCRQ9UNN8 238 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF232Q9UNY5 417 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 NBPF19A0A087WUL8 3843 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 CDHR4A6H8M9 788 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms