RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 CDK10Q15131 360 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 SLC37A3Q8NCC5 494 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 ZNF417Q8TAU3 575 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 SLC46A1Q96NT5 459 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 OR4K3Q96R72 315 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 CPPED1Q9BRF8 314 aaPredicted RBP12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 SLC5A7Q9GZV3 580 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 P2RY12Q9H244 342 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 FN3KQ9H479 309 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 GPN2Q9H9Y4 310 aaPredicted RBP12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 POLR2IP36954 125 aaKnown RBP12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 RBPJQ06330 500 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 MZT1Q08AG7 82 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 GPR19Q15760 415 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 UGT8Q16880 541 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 C14orf28Q4W4Y0 310 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 PPP1R35Q8TAP8 253 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 AKAP1Q92667 903 aaKnown RBP eCLIP12.12□□□□□ -0.472e-6■■■■□ 23.2
PTPRN2-203ENST00000389418 UCKL1Q9NWZ5 548 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 LOC102725191A0A1B0GVB3 256 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 OR2W5A6NFC9 320 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 C12orf71A8MTZ7 269 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 SYT5O00445 386 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 ZNF264O43296 627 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 CTNSO60931 367 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 PCBD1P61457 104 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 HYAL1Q12794 435 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 PLAG1Q6DJT9 500 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 SYCE2Q6PIF2 218 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 OR7G1Q8NGA0 311 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 FER1L6-AS2Q96M78 137 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 TREX2Q9BQ50 279 aaPredicted RBP12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 MYEF2Q9P2K5 600 aaKnown RBP12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 FARSAQ9Y285 508 aaKnown RBP12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 TRAV6A0A075B6T7 132 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 SLC5A10A0PJK1 596 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 C7orf72A4D263 438 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 A6NHS1 94 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 SIGLEC6O43699 453 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 ITGAMP11215 1152 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 GTF2F2P13984 249 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 NKAPLQ5M9Q1 402 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 FRMPD2BQ6IN97 320 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 SLC35F2Q8IXU6 374 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 NPRL2Q8WTW4 380 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 CHRDQ9H2X0 955 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 FAM86C1Q9NVL1 165 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 FKBP14Q9NWM8 211 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 SPHK1Q9NYA1 384 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 IER3IP1Q9Y5U9 82 aa12.12□□□□□ -0.47
PTPRN2-203ENST00000389418 ALPK2Q86TB3 2170 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 TAPBPO15533 448 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 SYT7O43581 403 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 CSNK1A1P48729 337 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 MECP2P51608 486 aaKnown RBP12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 STK11Q15831 433 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 TMEM244Q5VVB8 128 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 TMEM53Q6P2H8 277 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 KCTD20Q7Z5Y7 419 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 OR8S1Q8NH09 359 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 ITFG2Q969R8 447 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 MAELQ96JY0 434 aaKnown RBP12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 TEX37Q96LM6 180 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 NUDT22Q9BRQ3 303 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 PRR14Q9BWN1 585 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 PDFQ9HBH1 243 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 FAM183AA6NL82 134 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 ATG12O94817 140 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 FURINP09958 794 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 POU3F2P20265 443 aaPredicted RBP12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 ERP29P30040 261 aaKnown RBP12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 VRK2Q86Y07 508 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 SFTPA1Q8IWL2 248 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 SLC43A2Q8N370 569 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 GALNT6Q8NCL4 622 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 INTS14Q96SY0 518 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 CCDC32Q9BV29 185 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 SLC6A15Q9H2J7 730 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 LYRM4Q9HD34 91 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 MED17Q9NVC6 651 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 ERVK13-1Q9NX77 482 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 ZNF701M0R085 212 aaPredicted RBP12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 BCAS1O75363 584 aaPredicted RBP12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 MLC1Q15049 377 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 B3GLCTQ6Y288 498 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 SPARTQ8N0X7 666 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 ZBTB8BQ8NAP8 495 aaPredicted RBP12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 ALG8Q9BVK2 526 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 PARPBPQ9NWS1 579 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 KCNIP1Q9NZI2 227 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 PADI1Q9ULC6 663 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 PCDH17O14917 1159 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 MAGEA2P43356 314 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 HSD17B7P56937 341 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 CSNK1G2P78368 415 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 CHRNEQ04844 493 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 FAM205BPQ63HN1 556 aa12.11□□□□□ -0.47
PTPRN2-203ENST00000389418 MMP21Q8N119 569 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms