RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 RASL12Q9NYN1 266 aa13.9□□□□□ -0.18
CTNS-202ENST00000381870 B4GALT6Q9UBX8 382 aa13.9□□□□□ -0.18
CTNS-202ENST00000381870 F5H5P2 479 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 IL5P05113 134 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 TYRP1P17643 537 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 CD53P19397 219 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 ADH7P40394 386 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 AP3S2P59780 193 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 HTRA3P83110 453 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 ZNF697Q5TEC3 545 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 FAM199XQ6PEV8 388 aaPredicted RBP13.89□□□□□ -0.19
CTNS-202ENST00000381870 GID4Q8IVV7 300 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 C2orf73Q8N5S3 287 aaPredicted RBP13.89□□□□□ -0.19
CTNS-202ENST00000381870 CAMKVQ8NCB2 501 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 OR1M1Q8NGA1 313 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 BRIX1Q8TDN6 353 aaKnown RBP13.89□□□□□ -0.19
CTNS-202ENST00000381870 TMEM255BQ8WV15 326 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 SFT2D1Q8WV19 159 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 TCEAL4Q96EI5 215 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 WDR34Q96EX3 536 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.89□□□□□ -0.192e-6■■□□□ 11.7
CTNS-202ENST00000381870 MRPL17Q9NRX2 175 aaKnown RBP13.89□□□□□ -0.19
CTNS-202ENST00000381870 CLEC4EQ9ULY5 219 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 TRAV1-2A0A0B4J238 106 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 ANKRD20A5PA0PJZ0 165 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 STX11O75558 287 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 NDUFB6O95139 128 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 THY1P04216 161 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 ZGLP1P0C6A0 271 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 NDUFV2P19404 249 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 RFC3P40938 356 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 ZNF157P51786 506 aaPredicted RBP13.89□□□□□ -0.19
CTNS-202ENST00000381870 ART1P52961 327 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 PRR5P85299 388 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 ZNF85Q03923 595 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 STPG1Q5TH74 334 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 SLC6A19Q695T7 634 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 DMKNQ6E0U4 476 aaPredicted RBP13.89□□□□□ -0.19
CTNS-202ENST00000381870 NXPE4Q6UWF7 544 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 SLC16A13Q7RTY0 426 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 SERINC5Q86VE9 423 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 VRK2Q86Y07 508 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 TEX19Q8NA77 164 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 ZNF784Q8NCA9 323 aaPredicted RBP13.89□□□□□ -0.19
CTNS-202ENST00000381870 OR2AP1Q8NGE2 309 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 FCAMRQ8WWV6 532 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 NXPE3Q969Y0 559 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 F2RL3Q96RI0 385 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 ENKD1Q9H0I2 346 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 EQTNQ9NQ60 294 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 PRDM9Q9NQV7 894 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 AKAP7Q9P0M2 348 aaPredicted RBP13.89□□□□□ -0.19
CTNS-202ENST00000381870 ABT1Q9ULW3 272 aaKnown RBP13.89□□□□□ -0.19
CTNS-202ENST00000381870 KCNE3Q9Y6H6 103 aa13.89□□□□□ -0.19
CTNS-202ENST00000381870 OR6C68A6NDL8 312 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 H0YC42 278 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 KLF4O43474 513 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 SGCEO43556 437 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 TBX6O95947 436 aaPredicted RBP13.88□□□□□ -0.19
CTNS-202ENST00000381870 MAPK8P45983 427 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 PRMT2P55345 433 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 NRG3P56975 720 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 IL10RAQ13651 578 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 OLFML2AQ68BL7 652 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 SSX6Q7RTT6 188 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 RFLNBQ8N5W9 214 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 SLC25A38Q96DW6 304 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 LRIG1Q96JA1 1093 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 KLF16Q9BXK1 252 aaPredicted RBP13.88□□□□□ -0.19
CTNS-202ENST00000381870 OR51V1Q9H2C8 321 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 ZCCHC3Q9NUD5 404 aaKnown RBP13.88□□□□□ -0.19
CTNS-202ENST00000381870 TINAGQ9UJW2 476 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 MOKQ9UQ07 419 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 HTTP42858 3142 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 TMEM189-UBE2V1I3L0A0 370 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 CLUP10909 449 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 CNR1P21554 472 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 NOS3P29474 1203 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 CTSOP43234 321 aaPredicted RBP13.88□□□□□ -0.19
CTNS-202ENST00000381870 CLDN12P56749 244 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 UBE2IP63279 158 aaKnown RBP13.88□□□□□ -0.19
CTNS-202ENST00000381870 ST3GAL3Q11203 375 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 HENMT1Q5T8I9 393 aaKnown RBP13.88□□□□□ -0.19
CTNS-202ENST00000381870 CCDC36Q8IYA8 594 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 MS4A4EQ96PG1 132 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 UTP23Q9BRU9 249 aaKnown RBP13.88□□□□□ -0.19
CTNS-202ENST00000381870 SUV39H2Q9H5I1 410 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 GSN-AS1Q9NRJ2 163 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 TAS2R10Q9NYW0 307 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 OR10H1Q9Y4A9 318 aa13.88□□□□□ -0.19
CTNS-202ENST00000381870 A0A1B0GW55 424 aa13.87□□□□□ -0.19
CTNS-202ENST00000381870 UBE2QL1A1L167 161 aa13.87□□□□□ -0.19
CTNS-202ENST00000381870 EIF4E2O60573 245 aaKnown RBP13.87□□□□□ -0.19
CTNS-202ENST00000381870 C1orf105O95561 183 aa13.87□□□□□ -0.19
CTNS-202ENST00000381870 DUX4L2P0CJ85 424 aa13.87□□□□□ -0.19
CTNS-202ENST00000381870 DUX4L3P0CJ86 424 aa13.87□□□□□ -0.19
CTNS-202ENST00000381870 DUX4L4P0CJ87 422 aa13.87□□□□□ -0.19
CTNS-202ENST00000381870 DUX4L5P0CJ88 424 aa13.87□□□□□ -0.19
CTNS-202ENST00000381870 DUX4L6P0CJ89 424 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms