RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 HOXA6P31267 233 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 ARRB1P49407 418 aaPredicted RBP21.27■□□□□ 0.99
VPS16-201ENST00000380443 OAFQ86UD1 273 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 TMEM151BQ8IW70 566 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 SLC25A45Q8N413 288 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 DTWD2Q8NBA8 298 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 OR13C2Q8NGS9 318 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 SLC2A12Q8TD20 617 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 EXOSC3Q9NQT5 275 aaKnown RBP21.27■□□□□ 0.99
VPS16-201ENST00000380443 TXNL4BQ9NX01 149 aaKnown RBP21.27■□□□□ 0.99
VPS16-201ENST00000380443 ERVK13-1Q9NX77 482 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 DAPK2Q9UIK4 370 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 GSTK1Q9Y2Q3 226 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 PRR23D1E9PI22 279 aaPredicted RBP21.26■□□□□ 0.99
VPS16-201ENST00000380443 LOC110117498-PIK3R3F6TDL0 507 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 SNX4O95219 450 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 IFNGP01579 166 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 PRR23D2P0DMB1 279 aaPredicted RBP21.26■□□□□ 0.99
VPS16-201ENST00000380443 PNLIPP16233 465 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 GALP22466 123 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 FGF9P31371 208 aaPredicted RBP21.26■□□□□ 0.99
VPS16-201ENST00000380443 SLC37A1P57057 533 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 RUNX1T1Q06455 604 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 GPR50Q13585 617 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 ELAVL1Q15717 326 aaKnown RBP21.26■□□□□ 0.99
VPS16-201ENST00000380443 ARHGAP11AQ6P4F7 1023 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 TMPRSS11AQ6ZMR5 421 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 FAM71CQ8NEG0 241 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 GATAD2BQ8WXI9 593 aa21.26■□□□□ 0.99
VPS16-201ENST00000380443 A0A087WUJ7 227 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 A0A1B0GVT2 93 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 FRG2CA6NGY1 282 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 UPK1BO75841 260 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 SLC2A10O95528 541 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 PEPDP12955 493 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 ALAS2P22557 587 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 SRSF5Q13243 272 aaKnown RBP21.25■□□□□ 0.99
VPS16-201ENST00000380443 ATP1A4Q13733 1029 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 KCNAB1Q14722 419 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 OR2G6Q5TZ20 316 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 PLBD1Q6P4A8 553 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 CD200R1LQ6Q8B3 271 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 ACBD7Q8N6N7 88 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 OR4F15Q8NGB8 312 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 OR1L3Q8NH93 324 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 KCTD7Q96MP8 289 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 SECISBP2Q96T21 854 aaKnown RBP21.25■□□□□ 0.99
VPS16-201ENST00000380443 YIPF2Q9BWQ6 316 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 ZNF304Q9HCX3 659 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 IL20RAQ9UHF4 553 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 SF3B6Q9Y3B4 125 aaKnown RBP21.25■□□□□ 0.99
VPS16-201ENST00000380443 MAU2Q9Y6X3 613 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 KMT2EQ8IZD2 1858 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 GON4LQ3T8J9 2241 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 ZNF3P17036 446 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 FBLP22087 321 aaKnown RBP21.25■□□□□ 0.99
VPS16-201ENST00000380443 RPS19P39019 145 aaKnown RBP21.25■□□□□ 0.99
VPS16-201ENST00000380443 SEPHS1P49903 392 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 RNF144AP50876 292 aaPredicted RBP21.25■□□□□ 0.99
VPS16-201ENST00000380443 SPANXN2Q5MJ10 180 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 TM9SF4Q92544 642 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 SGTBQ96EQ0 304 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 ELF4Q99607 663 aaPredicted RBP21.25■□□□□ 0.99
VPS16-201ENST00000380443 ZNF649Q9BS31 505 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 PNO1Q9NRX1 252 aaKnown RBP21.25■□□□□ 0.99
VPS16-201ENST00000380443 ASB6Q9NWX5 421 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 HAO2Q9NYQ3 351 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 CLCA3PQ9Y6N3 262 aa21.25■□□□□ 0.99
VPS16-201ENST00000380443 IQCMA0A1B0GVH7 501 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 TRDV1A0A1B0GX56 115 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 SOCS6O14544 535 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 MAGEB3O15480 346 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 GIMD1P0DJR0 217 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 PSPHP78330 225 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 CFHR1Q03591 330 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 POU4F2Q12837 409 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 KIRREL2Q6UWL6 708 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 CCDC190Q86UF4 302 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 CADM2Q8N3J6 435 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 ZSCAN1Q8NBB4 408 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 BBS1Q8NFJ9 593 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 OR4C3Q8NH37 302 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 OR14A16Q8NHC5 309 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 LCORQ96JN0 433 aaPredicted RBP21.24■□□□□ 0.99
VPS16-201ENST00000380443 KLHL21Q9UJP4 597 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 ZDBF2Q9HCK1 2354 aa21.24■□□□□ 0.99
VPS16-201ENST00000380443 SPAG17Q6Q759 2223 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 TCRBV16S1A1N1A0A5B0 115 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 HYAL3O43820 417 aaPredicted RBP21.23■□□□□ 0.99
VPS16-201ENST00000380443 ADAM11O75078 769 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 RFPL3O75679 317 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 IGKV3-11P04433 115 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 PNMTP11086 282 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 SQSTM1Q13501 440 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 KRR1Q13601 381 aaKnown RBP21.23■□□□□ 0.99
VPS16-201ENST00000380443 FNDC7Q5VTL7 733 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 WBP2NLQ6ICG8 309 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 THSD4Q6ZMP0 1018 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 LHFPL3Q86UP9 236 aa21.23■□□□□ 0.99
VPS16-201ENST00000380443 C1orf210Q8IVY1 113 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms