RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CPEP16870 476 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 MAPK3P27361 379 aaPredicted RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 SLC11A2P49281 568 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 FLT3LGP49771 235 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 OR10K2Q6IF99 312 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 NRROSQ86YC3 692 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 MARCH9Q86YJ5 346 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 C10orf111Q8N326 155 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 FAM71CQ8NEG0 241 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 OR5M3Q8NGP4 307 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 NEIL3Q8TAT5 605 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 PAQR8Q8TEZ7 354 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 CMTM7Q96FZ5 175 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 HSH2DQ96JZ2 352 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 NRSN2Q9GZP1 204 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 PRM3Q9NNZ6 103 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 CYSLTR2Q9NS75 346 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 RLIMQ9NVW2 624 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 RNF186Q9NXI6 227 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 GNG8Q9UK08 70 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 TBC1D3FA6NER0 549 aaPredicted RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 OR51F1A6NGY5 319 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 CDRT15L2A8MXV6 281 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 TGOLN2O43493 480 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 ZNF821O75541 412 aaPredicted RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 PCDH8O95206 1070 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 MRPL19P49406 292 aaKnown RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 DGKEP52429 567 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 SORDQ00796 357 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 TAP2Q03519 686 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 LCP2Q13094 533 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 DDX39BQ13838 428 aaKnown RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 SLC22A10Q63ZE4 541 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 OGFOD3Q6PK18 319 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 PRSS55Q6UWB4 352 aaPredicted RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 TPGS1Q6ZTW0 290 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 JAGN1Q8N5M9 183 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 OR2L3Q8NG85 312 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 BBS10Q8TAM1 723 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 HASPINQ8TF76 798 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 SLC35F5Q8WV83 523 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 RNFT2Q96EX2 444 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 NRIP2Q9BQI9 281 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 GSX1Q9H4S2 264 aaPredicted RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 GJD2Q9UKL4 321 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 GSAPA4D1B5 854 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 SUPT3HB4E1H0 165 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 CLDN5O00501 218 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 EIF4E2O60573 245 aaKnown RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 MAFKO60675 156 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 CTNSO60931 367 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 FKTNO75072 461 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 OPN1LWP04000 364 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 RPA2P15927 270 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 FGF7P21781 194 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 RBMS1P29558 406 aaKnown RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 TM4SF4P48230 202 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 MVDP53602 400 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 DGCR2P98153 550 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 ELAVL1Q15717 326 aaKnown RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 PNLIPRP3Q17RR3 467 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 SLC39A12Q504Y0 691 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 TMEM244Q5VVB8 128 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 SLC36A4Q6YBV0 504 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 PEG10Q86TG7 708 aaKnown RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 TRAPPC5Q8IUR0 188 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 MSRB3Q8IXL7 192 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 NPWQ8N729 165 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 ZFP41Q8N8Y5 198 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 C19orf47Q8N9M1 422 aaKnown RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 OR52J3Q8NH60 311 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 XAGE5Q8WWM1 108 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 EXTL1Q92935 676 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 GPR20Q99678 358 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 NIPSNAP1Q9BPW8 284 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 NFKBIZQ9BYH8 718 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 KATNBL1Q9H079 304 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 OR52A5Q9H2C5 316 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 GPN1Q9HCN4 374 aaPredicted RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 MRPL15Q9P015 296 aaKnown RBP8.72□□□□□ -1.01
PTPRA-204ENST00000380393 DOK5Q9P104 306 aa8.72□□□□□ -1.01
PTPRA-204ENST00000380393 TNFRSF11BO00300 401 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 MPZL2O60487 215 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 SOD1P00441 154 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 PNPP00491 289 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 HMBSP08397 361 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 SNRNP70P08621 437 aaKnown RBP8.71□□□□□ -1.01
PTPRA-204ENST00000380393 CPN1P15169 458 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 PXNP49023 591 aaPredicted RBP8.71□□□□□ -1.01
PTPRA-204ENST00000380393 MAP2K5Q13163 448 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 FAM174BQ3ZCQ3 159 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 KHDC3LQ587J8 217 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 MORN1Q5T089 497 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 WDR88Q6ZMY6 472 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 HMGB4Q8WW32 186 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 NECAB3Q96P71 396 aaPredicted RBP8.71□□□□□ -1.01
PTPRA-204ENST00000380393 MED10Q9BTT4 135 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 ZFYVE1Q9HBF4 777 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 SEPSECSQ9HD40 501 aaKnown RBP8.71□□□□□ -1.01
PTPRA-204ENST00000380393 MIEF1Q9NQG6 463 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms