RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SYT14Q8NB59 555 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 SLC37A3Q8NCC5 494 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 C1orf216Q8TAB5 229 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 JAM3Q9BX67 310 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 CPNE5Q9HCH3 593 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 CACNA1IQ9P0X4 2223 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 NPIPB9F8W1W9 429 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 SNX4O95219 450 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 PPP1R3DO95685 299 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 DEFA1P59665 94 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 DEFA3P59666 94 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 PSPHP78330 225 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 NDUFAF6Q330K2 333 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 KIRREL2Q6UWL6 708 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 RTL4Q6ZR62 310 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 KLBQ86Z14 1044 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 OR4C3Q8NH37 302 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 SLC35B4Q969S0 331 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 TBX5Q99593 518 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 SDHCQ99643 169 aaPredicted RBP18.62■□□□□ 0.57
VSX1-202ENST00000376709 PELOQ9BRX2 385 aaKnown RBP18.62■□□□□ 0.57
VSX1-202ENST00000376709 CCDC32Q9BV29 185 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 OR51V1Q9H2C8 321 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 PRODH2Q9UF12 536 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 SLC35A3Q9Y2D2 325 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 CMAHPQ9Y471 501 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 CEP192Q8TEP8 1941 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 FITM1A5D6W6 292 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 SLC22A31A6NKX4 558 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 C17orf105B2RV13 164 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 J3QRE1 110 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 PTP4A3O75365 173 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 OR2B3O76000 313 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 PTTG1O95997 202 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 DCNP07585 359 aaKnown RBP18.61■□□□□ 0.57
VSX1-202ENST00000376709 ZNF3P17036 446 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 ALAS2P22557 587 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 FGF9P31371 208 aaPredicted RBP18.61■□□□□ 0.57
VSX1-202ENST00000376709 ACSM1Q08AH1 577 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 DBPQ10586 325 aaPredicted RBP18.61■□□□□ 0.57
VSX1-202ENST00000376709 CDC20Q12834 499 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 ARMC4Q5T2S8 1044 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 OGFOD3Q6PK18 319 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 CD200R1LQ6Q8B3 271 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 TTLL10Q6ZVT0 673 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 CMIPQ8IY22 773 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 ZNF615Q8N8J6 731 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 ASB15Q8WXK1 588 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 CLIP3Q96DZ5 547 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 TNFRSF13CQ96RJ3 184 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 MED18Q9BUE0 208 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 RNF215Q9Y6U7 377 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 COL6A3P12111 3177 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 TRDV1A0A1B0GX56 115 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 SMIM30A4D0T7 59 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 SERINC4A6NH21 518 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 HLA-DPB1P04440 258 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 SPNP16150 400 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 ARL4DP49703 201 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 EPHA4P54764 986 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 SDR16C5Q8N3Y7 309 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 ATP6V1C2Q8NEY4 427 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 PTP4A1Q93096 173 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 ALG8Q9BVK2 526 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 HDHD5Q9BXW7 423 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 CHRNA10Q9GZZ6 450 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 RAB33BQ9H082 229 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 ISG20L2Q9H9L3 353 aaKnown RBP18.61■□□□□ 0.57
VSX1-202ENST00000376709 CUTCQ9NTM9 273 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 C14orf119Q9NWQ9 140 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 BAIAP2Q9UQB8 552 aa18.61■□□□□ 0.57
VSX1-202ENST00000376709 SLC6A6P31641 620 aa18.6■□□□□ 0.57
VSX1-202ENST00000376709 KRR1Q13601 381 aaKnown RBP18.6■□□□□ 0.57
VSX1-202ENST00000376709 OR8H2Q8N162 312 aa18.6■□□□□ 0.57
VSX1-202ENST00000376709 CAMKK1Q8N5S9 505 aa18.6■□□□□ 0.57
VSX1-202ENST00000376709 OR10H4Q8NGA5 316 aa18.6■□□□□ 0.57
VSX1-202ENST00000376709 EFHD2Q96C19 240 aaPredicted RBP18.6■□□□□ 0.57
VSX1-202ENST00000376709 ART5Q96L15 291 aa18.6■□□□□ 0.57
VSX1-202ENST00000376709 KATNB1Q9BVA0 655 aa18.6■□□□□ 0.57
VSX1-202ENST00000376709 PNO1Q9NRX1 252 aaKnown RBP18.6■□□□□ 0.57
VSX1-202ENST00000376709 PLEKHB1Q9UF11 243 aaPredicted RBP18.6■□□□□ 0.57
VSX1-202ENST00000376709 DAPL1A0PJW8 107 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 TTC36A6NLP5 189 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 TMEM150CB9EJG8 249 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 CASKO14936 926 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 REM1O75628 298 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 HK1P19367 917 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 GPR143P51810 404 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 DMWDQ09019 674 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 CRMP1Q14194 572 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 TMEM99Q8N816 258 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 CYB561A3Q8NBI2 242 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 AP3S1Q92572 193 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 KISS1RQ969F8 398 aaPredicted RBP18.59■□□□□ 0.57
VSX1-202ENST00000376709 WDFY2Q96P53 400 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 TEAD3Q99594 435 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 COQ7Q99807 217 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 MCCC2Q9HCC0 563 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 MKKSQ9NPJ1 570 aaPredicted RBP18.59■□□□□ 0.57
VSX1-202ENST00000376709 GMEB2Q9UKD1 530 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms