RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TSC22D1Q15714 1073 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 ZNF141Q15928 474 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 DPY19L1Q2PZI1 675 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 ARHGAP11BQ3KRB8 267 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 ANXA8L1Q5VT79 327 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 C3orf33Q6P1S2 294 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 ZNF611Q8N823 705 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 ZBTB9Q96C00 473 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 ZNF524Q96C55 264 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 OR5B2Q96R09 309 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 TMEM204Q9BSN7 226 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 THUMPD3Q9BV44 507 aaKnown RBP18.71■□□□□ 0.59
VSX1-201ENST00000376707 LAT2Q9GZY6 243 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 CXorf56Q9H5V9 222 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 KLHL9Q9P2J3 617 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 MKLN1Q9UL63 735 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 TMEM120BA0PK00 339 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 TRIM64A6NGJ6 449 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 TRIM64BA6NI03 449 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 ETV2O00321 342 aaPredicted RBP18.7■□□□□ 0.58
VSX1-201ENST00000376707 LY6G6DO95868 133 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 AGR2O95994 175 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 CLNS1AP54105 237 aaKnown RBP18.7■□□□□ 0.58
VSX1-201ENST00000376707 SKP2Q13309 424 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 TIGD2Q4W5G0 525 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 SFRP5Q5T4F7 317 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 ATAD3BQ5T9A4 648 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 HHATQ5VTY9 493 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 EIF3MQ7L2H7 374 aaKnown RBP18.7■□□□□ 0.58
VSX1-201ENST00000376707 OLIG3Q7RTU3 272 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 VPS37AQ8NEZ2 397 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 ST8SIA1Q92185 356 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 AKAP1Q92667 903 aaKnown RBP eCLIP18.7■□□□□ 0.58
VSX1-201ENST00000376707 KISS1RQ969F8 398 aaPredicted RBP18.7■□□□□ 0.58
VSX1-201ENST00000376707 PAIP2Q9BPZ3 127 aaKnown RBP18.7■□□□□ 0.58
VSX1-201ENST00000376707 ZNF350Q9GZX5 532 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 QRSL1Q9H0R6 528 aaKnown RBP18.7■□□□□ 0.58
VSX1-201ENST00000376707 OR51I1Q9H343 314 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 NGBQ9NPG2 151 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 SERINC1Q9NRX5 453 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 KCNE5Q9UJ90 142 aa18.7■□□□□ 0.58
VSX1-201ENST00000376707 TMCC2O75069 709 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 SNNO75324 88 aaPredicted RBP18.69■□□□□ 0.58
VSX1-201ENST00000376707 UGT2B17O75795 530 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 CPSF4O95639 269 aaKnown RBP18.69■□□□□ 0.58
VSX1-201ENST00000376707 ADAP00813 363 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 GUSBP08236 651 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 UBTFL6P0CB48 400 aaPredicted RBP18.69■□□□□ 0.58
VSX1-201ENST00000376707 PGCP20142 388 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 CASP9P55211 416 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 CAPRIN1Q14444 709 aaKnown RBP18.69■□□□□ 0.58
VSX1-201ENST00000376707 CASP8Q14790 479 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 P2RY6Q15077 328 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 AP1ARQ63HQ0 302 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 HEPHL1Q6MZM0 1159 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 ANKRD46Q86W74 232 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 ZNF619Q8N2I2 560 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 ANKRD42Q8N9B4 389 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 IGFBPL1Q8WX77 278 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 TMEM234Q8WY98 164 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 HSD17B8Q92506 261 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 BCO1Q9HAY6 547 aa18.69■□□□□ 0.58
VSX1-201ENST00000376707 RAI1Q7Z5J4 1906 aaPredicted RBP18.68■□□□□ 0.58
VSX1-201ENST00000376707 NAV3Q8IVL0 2385 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 CENPVL1A0A0U1RR11 272 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 SDHDO14521 159 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 H6PDO95479 791 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 ALDOCP09972 364 aaKnown RBP18.68■□□□□ 0.58
VSX1-201ENST00000376707 OR12D1P0DN82 309 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 UQCRC2P22695 453 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 SESN3P58005 492 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 RASGEF1BQ0VAM2 473 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 MERTKQ12866 999 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 ITGADQ13349 1161 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 TAB1Q15750 504 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 SPANXN4Q5MJ08 99 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 TNFAIP8L2Q6P589 184 aaPredicted RBP18.68■□□□□ 0.58
VSX1-201ENST00000376707 RAB3IL1Q8TBN0 382 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 XAGE5Q8WWM1 108 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 OIT3Q8WWZ8 545 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 USB1Q9BQ65 265 aaKnown RBP18.68■□□□□ 0.58
VSX1-201ENST00000376707 PSD2Q9BQI7 771 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 ESRP2Q9H6T0 727 aaKnown RBP18.68■□□□□ 0.58
VSX1-201ENST00000376707 ZNF701Q9NV72 531 aaPredicted RBP18.68■□□□□ 0.58
VSX1-201ENST00000376707 THAP1Q9NVV9 213 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 WDR45Q9Y484 360 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 RNF115Q9Y4L5 304 aa18.68■□□□□ 0.58
VSX1-201ENST00000376707 ARID1AO14497 2285 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 E9PBE3 544 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 SMAD9O15198 467 aaKnown RBP18.67■□□□□ 0.58
VSX1-201ENST00000376707 CLOCKO15516 846 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 KIAA0513O60268 411 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 DNAJA2O60884 412 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 CNOT4O95628 575 aaKnown RBP18.67■□□□□ 0.58
VSX1-201ENST00000376707 PAX1P15863 534 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 OR3A2P47893 321 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 FAM174BQ3ZCQ3 159 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 SAXO2Q658L1 398 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 RAB8BQ92930 207 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 NEURL3Q96EH8 262 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms