RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CAMKVQ8NCB2 501 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 ATP6V1C2Q8NEY4 427 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 DOK4Q8TEW6 326 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 GIMAP1Q8WWP7 306 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 SIPA1Q96FS4 1042 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 GPX7Q96SL4 187 aaPredicted RBP8.84□□□□□ -0.99
TRIM39-202ENST00000376659 MMP28Q9H239 520 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 MTIF3Q9H2K0 278 aaKnown RBP8.84□□□□□ -0.99
TRIM39-202ENST00000376659 TIGARQ9NQ88 270 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 C12orf4Q9NQ89 552 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 ZSCAN5BA6NJL1 495 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 SLC30A4O14863 429 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 RGS9O75916 674 aaPredicted RBP8.83□□□□□ -1
TRIM39-202ENST00000376659 AK1P00568 194 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 MYL12AP19105 171 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 DRD1P21728 446 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 APEX1P27695 318 aaKnown RBP8.83□□□□□ -1
TRIM39-202ENST00000376659 IFNA8P32881 189 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 MLLT3P42568 568 aaPredicted RBP8.83□□□□□ -1
TRIM39-202ENST00000376659 CCR5P51681 352 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 STK11Q15831 433 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 CNIH2Q6PI25 160 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 Q6ZSR6 202 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 LIPHQ8WWY8 451 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 BPIFA2Q96DR5 249 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 SECISBP2Q96T21 854 aaKnown RBP8.83□□□□□ -1
TRIM39-202ENST00000376659 TEAD3Q99594 435 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 ALG8Q9BVK2 526 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 FOLH1BQ9HBA9 442 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 MMP17Q9ULZ9 603 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 SMIM30A4D0T7 59 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 FITM1A5D6W6 292 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 HMX3A6NHT5 357 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 A6NL46 340 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 C2orf74A8MZ97 194 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 ST6GAL1P15907 406 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 CFL1P23528 166 aaKnown RBP8.83□□□□□ -1
TRIM39-202ENST00000376659 HLA-DMAP28067 261 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 RFX3P48380 749 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 DMWDQ09019 674 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 CRTC2Q53ET0 693 aaPredicted RBP8.83□□□□□ -1
TRIM39-202ENST00000376659 RANBP3LQ86VV4 465 aaPredicted RBP8.83□□□□□ -1
TRIM39-202ENST00000376659 C7orf57Q8NEG2 295 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 OR52R1Q8NGF1 315 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 RPLP0P6Q8NHW5 317 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 SLC7A6Q92536 515 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 LRFN5Q96NI6 719 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 KLHDC3Q9BQ90 382 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 KLHL25Q9H0H3 589 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 CYSLTR2Q9NS75 346 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 PCDHGB7Q9Y5F8 929 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 MPDZO75970 2070 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 PCP4L1A6NKN8 68 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 CDK2AP1O14519 115 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 OGG1O15527 345 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 AKAP8O43823 692 aaKnown RBP8.83□□□□□ -1
TRIM39-202ENST00000376659 HCN1O60741 890 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 ELK1P19419 428 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 CLDN20P56880 219 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 FUT7Q11130 342 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 GPR68Q15743 365 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 AMZ1Q400G9 498 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 DDI2Q5TDH0 399 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 RPL13AP3Q6NVV1 102 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 KLBQ86Z14 1044 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 SLC38A6Q8IZM9 456 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 VWA5B2Q8N398 1253 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 FRMD1Q8N878 549 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 OR5J2Q8NH18 312 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 ZPLD1Q8TCW7 415 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 SLC2A12Q8TD20 617 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 PHOX2BQ99453 314 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 ZNF559Q9BR84 538 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 MARVELD1Q9BSK0 173 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 TRAF4Q9BUZ4 470 aaPredicted RBP8.83□□□□□ -1
TRIM39-202ENST00000376659 TMED9Q9BVK6 235 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 TMEM106CQ9BVX2 250 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 SEMA6CQ9H3T2 930 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 STARD5Q9NSY2 213 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 BABAM2Q9NXR7 383 aa8.83□□□□□ -1
TRIM39-202ENST00000376659 A0A1B0GTQ1 180 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 A0A1B0GWA3 101 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 CD8B2A6NJW9 211 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 C12orf71A8MTZ7 269 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 EIF4EP06730 217 aaKnown RBP8.82□□□□□ -1
TRIM39-202ENST00000376659 SBK2P0C263 348 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 CD8BP10966 210 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 KRT33BQ14525 404 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 TCEA2Q15560 299 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 SLC36A2Q495M3 483 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 PLA1AQ53H76 456 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 STPG1Q5TH74 334 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 KIRREL2Q6UWL6 708 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 NUDT18Q6ZVK8 323 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 FAM122BQ7Z309 247 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 HDHD5Q9BXW7 423 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 UCK1Q9HA47 277 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 SPENQ96T58 3664 aaKnown RBP8.82□□□□□ -1
TRIM39-202ENST00000376659 TRAV27A0A087WT01 109 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 RASGRP1O95267 797 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms