RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 EXOSC7Q15024 291 aaKnown RBP13.46□□□□□ -0.26
MSH5-201ENST00000375703 NTRK2Q16620 822 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 SLC25A35Q3KQZ1 300 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 FCRL6Q6DN72 434 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 LAMTOR1Q6IAA8 161 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 PYHIN1Q6K0P9 492 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 PXKQ7Z7A4 578 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 OR10G6Q8NH81 332 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 GHSRQ92847 366 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 TSACCQ96A04 125 aaPredicted RBP13.46□□□□□ -0.26
MSH5-201ENST00000375703 TNFRSF13CQ96RJ3 184 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 STACQ99469 402 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 IRF2BPLQ9H1B7 796 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 MAT2BQ9NZL9 334 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 ERVH48-1M5A8F1 160 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 TNFSF14O43557 240 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 SOX30O94993 753 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 PPP1R3DO95685 299 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 ATP1B1P05026 303 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 UGT2B7P16662 529 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 SLC2A5P22732 501 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 GDI1P31150 447 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 ACTR1BP42025 376 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 SRP9P49458 86 aaKnown RBP13.45□□□□□ -0.26
MSH5-201ENST00000375703 NRG3P56975 720 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 ACTR1AP61163 376 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 POU6F2P78424 691 aaPredicted RBP13.45□□□□□ -0.26
MSH5-201ENST00000375703 EXOSC6Q5RKV6 272 aaKnown RBP13.45□□□□□ -0.26
MSH5-201ENST00000375703 BCL2L15Q5TBC7 163 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 ZCCHC12Q6PEW1 402 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 HYLS1Q96M11 299 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 KXD1Q9BQD3 176 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 ZNF559Q9BR84 538 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 MED28Q9H204 178 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 PRDM9Q9NQV7 894 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 MRPS2Q9Y399 296 aaKnown RBP13.45□□□□□ -0.26
MSH5-201ENST00000375703 TRAV6A0A075B6T7 132 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 GXYLT2A0PJZ3 443 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 SC5DO75845 299 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 GPR75O95800 540 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 RAB3BP20337 219 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 PPP2CBP62714 309 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 PPP2CAP67775 309 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 CCDC58Q4VC31 144 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 FAM205BPQ63HN1 556 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 ZNF613Q6PF04 617 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 RTL4Q6ZR62 310 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 CREB3L2Q70SY1 520 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 PRSS41Q7RTY9 318 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 MS4A15Q8N5U1 240 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 TMEM52Q8NDY8 209 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 OR5J2Q8NH18 312 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 HERVK_113Q902F9 699 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 PGLYRP3Q96LB9 341 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 CAPN10Q9HC96 672 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 LYRM4Q9HD34 91 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 CLEC4AQ9UMR7 237 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 CA5BQ9Y2D0 317 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 SPACA6W5XKT8 324 aa13.45□□□□□ -0.26
MSH5-201ENST00000375703 K7EQS6 105 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 BRINP1O60477 761 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 PEPDP12955 493 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 KIR2DL1P43626 348 aaPredicted RBP13.44□□□□□ -0.26
MSH5-201ENST00000375703 PRICKLE4Q2TBC4 344 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 DMKNQ6E0U4 476 aaPredicted RBP13.44□□□□□ -0.26
MSH5-201ENST00000375703 FAAH2Q6GMR7 532 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 ZNF614Q8N883 585 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 CNOT9Q92600 299 aaKnown RBP13.44□□□□□ -0.26
MSH5-201ENST00000375703 C14orf105Q9NVL8 296 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 HAO2Q9NYQ3 351 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 PILRAQ9UKJ1 303 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 FBXL21Q9UKT6 434 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 BAIAP2Q9UQB8 552 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 A0A1W2PPK0 400 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 A0A1W2PRG6 482 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 OR6C74A6NCV1 312 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 FABP7O15540 132 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 AK1P00568 194 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 CT62P0C5K7 136 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 DRD5P21918 477 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 BTCP35070 178 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 HCCSP53701 268 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 FCN2Q15485 313 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 ITPRIPL2Q3MIP1 535 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 LYPD8Q6UX82 237 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 SSX6Q7RTT6 188 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 LRRC17Q8N6Y2 441 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 TEX19Q8NA77 164 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 OR5T3Q8NGG3 340 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 OR13C5Q8NGS8 318 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 SLC2A12Q8TD20 617 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 RERGQ96A58 199 aaPredicted RBP13.44□□□□□ -0.26
MSH5-201ENST00000375703 PHF21AQ96BD5 680 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 TMEM168Q9H0V1 697 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 DPAGT1Q9H3H5 408 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 ACTR10Q9NZ32 417 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 MRPS7Q9Y2R9 242 aaKnown RBP13.44□□□□□ -0.26
MSH5-201ENST00000375703 NPFFR2Q9Y5X5 522 aa13.44□□□□□ -0.26
MSH5-201ENST00000375703 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.43□□□□□ -0.26
MSH5-201ENST00000375703 H0Y8X5 98 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms