RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ELP3Q9H9T3 547 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 FKBP11Q9NYL4 201 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 NDRG4Q9ULP0 352 aaKnown RBP6.23□□□□□ -1.41
UBR4-204ENST00000375254 LOC100289279A0A1B0GTE1 492 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 ABCD3P28288 659 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 NOVA1P51513 510 aaKnown RBP6.23□□□□□ -1.41
UBR4-204ENST00000375254 ATP6V1FQ16864 119 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 HFE2Q6ZVN8 426 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 FCRLAQ7L513 359 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 ABI3BPQ7Z7G0 1075 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 OR14A16Q8NHC5 309 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 CD300LBA8K4G0 201 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 ADH1BP00325 375 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 ZNF763Q0D2J5 394 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 LEXMQ3ZCV2 418 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 OR52P1PQ8NH57 321 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 PINX1Q96BK5 328 aaKnown RBP6.23□□□□□ -1.41
UBR4-204ENST00000375254 PARD6GQ9BYG4 376 aaPredicted RBP6.23□□□□□ -1.41
UBR4-204ENST00000375254 MTHFD2P13995 350 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 SSTR4P31391 388 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 ERFEQ4G0M1 354 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 GPC2Q8N158 579 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 SLAMF9Q96A28 289 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 KIRREL1Q96J84 757 aa6.23□□□□□ -1.41
UBR4-204ENST00000375254 TMEM189-UBE2V1I3L0A0 370 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 AKR1A1P14550 325 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 FOXB2Q5VYV0 432 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 SLC35G5Q96KT7 338 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 TBX5Q99593 518 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 HCAR1Q9BXC0 346 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 URGCP-MRPS24S4R325 110 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 DPP4P27487 766 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 SPRED3Q2MJR0 410 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 GLYR1Q49A26 553 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 KDM4DQ6B0I6 523 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ENPP6Q6UWR7 440 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ZMIZ2Q8NF64 920 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 OR2G3Q8NGZ4 309 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 PLK3Q9H4B4 646 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 IL21RQ9HBE5 538 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 MLH3Q9UHC1 1453 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 G3V3Q6 166 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 I6L893 689 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 TXNDC12O95881 172 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 KNG1P01042 644 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 PPM1AP35813 382 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 AKR1C1Q04828 323 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 Q6ZN92 141 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 BOLLQ8N9W6 283 aaKnown RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 NDUFB11Q9NX14 153 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 OR5H15A6NDH6 313 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 OR5H1A6NKK0 313 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 BCL2L11O43521 198 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 CTXN2P0C2S0 81 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 NT5EP21589 574 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 AKT2P31751 481 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 MC1RQ01726 317 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ZNF534Q76KX8 674 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 BPIFB2Q8N4F0 458 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 C1orf74Q96LT6 269 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 C1QTNF2Q9BXJ5 285 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ZCCHC3Q9NUD5 404 aaKnown RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 MPTX1A8MV57 137 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 SFTPDP35247 375 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 TMEM244Q5VVB8 128 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 FAM26EQ8N5C1 309 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 EPHA6Q9UF33 1036 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 AK3Q9UIJ7 227 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 FBXO4Q9UKT5 387 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 GPR45Q9Y5Y3 372 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 HRO43593 1189 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 PLGP00747 810 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 IRF9Q00978 393 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 PGBD5Q8N414 524 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ZNF383Q8NA42 475 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 OR1S1Q8NH92 325 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ARNT2Q9HBZ2 717 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 GJD2Q9UKL4 321 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 TEX50A0A1B0GTY4 177 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 MYOCOSA0A1B0GUC4 107 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 GAGE10A6NGK3 116 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ZNF724A8MTY0 619 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 SLC11A1P49279 550 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 HSPB3Q12988 150 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 PDLIM3Q53GG5 364 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 NKAIN2Q5VXU1 208 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 APOBEC3HQ6NTF7 200 aaKnown RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 ANKRD9Q96BM1 317 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 SH3BGRLO75368 114 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 MT-ND4P03905 459 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 RBM23Q86U06 439 aaKnown RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 SMPDL3BQ92485 455 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 CDS1Q92903 461 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 CLSTN3Q9BQT9 956 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 EVA1BQ9NVM1 165 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 PRDM15P57071 1507 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 XKRY2A2RUG3 117 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 TSPAN3O60637 253 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 SIX6O95475 246 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 EMP3P54852 163 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms