RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 LRIT2A6NDA9 550 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 ZGLP1P0C6A0 271 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 PRG2P13727 222 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 GLULP15104 373 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 CSNK1G2P78368 415 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 PITPNAQ00169 270 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 OR56B4Q8NH76 319 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 AHCYL2Q96HN2 611 aaKnown RBP10.28□□□□□ -0.76
CCDC40-203ENST00000374877 ANKRD19PQ9H560 264 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 XKR8Q9H6D3 395 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 POLMQ9NP87 494 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-203ENST00000374877 SPINT1O43278 529 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 ATF1P18846 271 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 AGERQ15109 404 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 LTB4RQ15722 352 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 NLRC3Q7RTR2 1065 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 PRSS42Q7Z5A4 293 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 CYB561A3Q8NBI2 242 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 SFXN5Q8TD22 340 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 ADAMTS15Q8TE58 950 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 GANCQ8TET4 914 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 GHSRQ92847 366 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 GCDHQ92947 438 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-203ENST00000374877 RIT1Q92963 219 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 ZNF764Q96H86 408 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-203ENST00000374877 LINC00615Q96LM1 132 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-203ENST00000374877 AICDAQ9GZX7 198 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 C20orf85Q9H1P6 137 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 CACYBPQ9HB71 228 aaKnown RBP10.28□□□□□ -0.76
CCDC40-203ENST00000374877 COL4A2P08572 1712 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 UNC119BA6NIH7 251 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 EMC8O43402 210 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 KLF4O43474 513 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 PLPP2O43688 288 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 AIFM1O95831 613 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 CLUP10909 449 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 CSNK2A2P19784 350 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-203ENST00000374877 CTHP32929 405 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 MMP15P51511 669 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 OR51Q1Q8NH59 317 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 OR5K2Q8NHB8 316 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 COL26A1Q96A83 441 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 IFT27Q9BW83 186 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 JAM3Q9BX67 310 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 C1QTNF2Q9BXJ5 285 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 OR10A4Q9H209 315 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 KRCC1Q9NPI7 259 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-203ENST00000374877 ZC4H2Q9NQZ6 224 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 GPR34Q9UPC5 381 aa10.28□□□□□ -0.76
CCDC40-203ENST00000374877 CDHR4A6H8M9 788 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 C1QTNF3-AMACRE9PGA6 284 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 PRR23D1E9PI22 279 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ZIC2O95409 532 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ALDOBP05062 364 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 GYPBP06028 91 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 PRR23D2P0DMB1 279 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 HOXB3P14651 431 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 GDNFP39905 211 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 MAP2K6P52564 334 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 TRA2BP62995 288 aaKnown RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 SMAD2Q15796 467 aaKnown RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 PUS10Q3MIT2 529 aaKnown RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 LINGO2Q7L985 606 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 KCTD20Q7Z5Y7 419 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ADGRG3Q86Y34 549 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 OR5J2Q8NH18 312 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 THAP4Q8WY91 577 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 CD180Q99467 661 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 CDX2Q99626 313 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 PCBD2Q9H0N5 130 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 FBRSQ9HAH7 460 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 PRSS16Q9NQE7 514 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 CALML5Q9NZT1 146 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 RPS6KB2Q9UBS0 482 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ZMIZ1Q9ULJ6 1067 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 A0A1W2PPV9 198 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 FAM86C2PA6NEL3 165 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ANTXRLA6NF34 631 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 C4orf51C9J302 202 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 MAGEB4O15481 346 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 PEX14O75381 377 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 OR5F1O95221 314 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 RPN2P04844 631 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ACSM4P0C7M7 580 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 CERS1P27544 350 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 TEAD1P28347 426 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 VEGFCP49767 419 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 BTN1A1Q13410 526 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 TCTE1Q5JU00 501 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 SLC22A10Q63ZE4 541 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 FAAH2Q6GMR7 532 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 SFTPA1Q8IWL2 248 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 SLC44A3Q8N4M1 653 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ACOT4Q8N9L9 421 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 LINC01555Q8NAE3 123 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 PFN4Q8NHR9 129 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 HLA-CQ95604 372 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ARSGQ96EG1 525 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 PPA2Q9H2U2 334 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 LYARQ9NX58 379 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms