RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 TPOP07202 933 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 STSP08842 583 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 PEPDP12955 493 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 GP1BBP13224 206 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 CPN1P15169 458 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 ZNF708P17019 499 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 HTR3AP46098 478 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 UQCRFS1P47985 274 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 LHX2P50458 406 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 RGS8P57771 180 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-201ENST00000374673 COPZ1P61923 177 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 RAC1P63000 192 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 BCL2A1Q16548 175 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 PLEKHM3Q6ZWE6 761 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 CD163Q86VB7 1156 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 PM20D2Q8IYS1 436 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 PROX1Q92786 737 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 WDYHV1Q96HA8 205 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 WFDC6Q9BQY6 131 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 MUC13Q9H3R2 512 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 ADPRHL2Q9NX46 363 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 ACAD8Q9UKU7 415 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 SNX13Q9Y5W8 968 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 AP4B1Q9Y6B7 739 aa13.56□□□□□ -0.24
HSPG2-201ENST00000374673 MED12Q93074 2177 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 H3BML4 177 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 M0R3H8 397 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 ARPC2O15144 300 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 FMO6PO60774 539 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 WISP1O95388 367 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 SERPINA1P01009 418 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 POU3F2P20265 443 aaPredicted RBP13.55□□□□□ -0.24
HSPG2-201ENST00000374673 ME2P23368 584 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 APOBEC1P41238 236 aaKnown RBP13.55□□□□□ -0.24
HSPG2-201ENST00000374673 SLC1A3P43003 542 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 STARP49675 285 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 CLDN18P56856 261 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 NCALDP61601 193 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 SELENBP1Q13228 472 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 GXYLT1Q4G148 440 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 EMC4Q5J8M3 183 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 WBP2NLQ6ICG8 309 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 RANBP3LQ86VV4 465 aaPredicted RBP13.55□□□□□ -0.24
HSPG2-201ENST00000374673 LACC1Q8IV20 430 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 LSMEM1Q8N8F7 131 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 OR52E4Q8NGH9 312 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 OR4D11Q8NGI4 311 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 LZICQ8WZA0 190 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 THTPAQ9BU02 230 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 ADAM19Q9H013 955 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 PCDHAC1Q9H158 963 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 PNPLA3Q9NST1 481 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 STOML1Q9UBI4 398 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 RPS6KA6Q9UK32 745 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 SLC9A8Q9Y2E8 581 aa13.55□□□□□ -0.24
HSPG2-201ENST00000374673 ARHGAP21Q5T5U3 1957 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 FIGNL2A6NMB9 653 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 EFNA2O43921 213 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 TPST2O60704 377 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 WDR1O75083 606 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 DNAJC8O75937 253 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-201ENST00000374673 PDE5AO76074 875 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 GABRA1P14867 456 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 HTR2AP28223 471 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 MSX2P35548 267 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-201ENST00000374673 CA7P43166 264 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 POLR2HP52434 150 aaKnown RBP13.54□□□□□ -0.24
HSPG2-201ENST00000374673 CASP6P55212 293 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 HOXC5Q00444 222 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 MERTKQ12866 999 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 TRIM25Q14258 630 aaKnown RBP13.54□□□□□ -0.24
HSPG2-201ENST00000374673 NPTX1Q15818 432 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 C3AR1Q16581 482 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 C3orf33Q6P1S2 294 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 PGM2L1Q6PCE3 622 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 CCDC121Q6ZUS5 278 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 DOLPP1Q86YN1 238 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 EID3Q8N140 333 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 CADM2Q8N3J6 435 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 OR6T1Q8NGN1 323 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 TPD52L3Q96J77 140 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 CLPTM1LQ96KA5 538 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 NSMCE2Q96MF7 247 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 ZNF559Q9BR84 538 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 TRIM2Q9C040 744 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 TP63Q9H3D4 680 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-201ENST00000374673 CTPS2Q9NRF8 586 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 SERINC1Q9NRX5 453 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 DCAF13Q9NV06 445 aaKnown RBP13.54□□□□□ -0.24
HSPG2-201ENST00000374673 ACTR3BQ9P1U1 418 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 OSGIN1Q9UJX0 560 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 SAMD4AQ9UPU9 718 aaKnown RBP13.54□□□□□ -0.24
HSPG2-201ENST00000374673 OSGIN2Q9Y236 505 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 SH3GLB1Q9Y371 365 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 CFAP46Q8IYW2 2715 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 ESPL1Q14674 2120 aa13.54□□□□□ -0.24
HSPG2-201ENST00000374673 PHF3Q92576 2039 aaKnown RBP13.53□□□□□ -0.24
HSPG2-201ENST00000374673 AHRRA9YTQ3 701 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 J3QKU1 62 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 GSC2O15499 205 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms