RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TRIM3O75382 744 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 MT-ATP6P00846 226 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 IGKV3-11P04433 115 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 IFNA16P05015 189 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 CT62P0C5K7 136 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 NOS3P29474 1203 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 DUSP3P51452 185 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 SUMO3P55854 103 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 MAZP56270 477 aaKnown RBP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC37A1P57057 533 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 PPP3R1P63098 170 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 TRA2AQ13595 282 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 SSX1Q16384 188 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 MAPK14Q16539 360 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 PDZK1Q5T2W1 519 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 GPR139Q6DWJ6 353 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 RHBDD2Q6NTF9 364 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 NIPAL3Q6P499 406 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 XKRXQ6PP77 449 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC29A4Q7RTT9 530 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 CDH24Q86UP0 819 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 WDR5BQ86VZ2 330 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 TMEM151BQ8IW70 566 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 CENPSQ8N2Z9 138 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 BCORP1Q8N888 145 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF485Q8NCK3 441 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 TMEM52Q8NDY8 209 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 OR5T3Q8NGG3 340 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 C16orf52Q8NHV5 167 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 CHAC2Q8WUX2 184 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 TMEM255BQ8WV15 326 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 SENP5Q96HI0 755 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 PTCHD1Q96NR3 888 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 TGM7Q96PF1 710 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 OR5M11Q96RB7 305 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 GPA33Q99795 319 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 WFDC6Q9BQY6 131 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 IFT27Q9BW83 186 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 QRSL1Q9H0R6 528 aaKnown RBP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 OR51E2Q9H255 320 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 EGLN3Q9H6Z9 239 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 ZBTB20Q9HC78 741 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 ERVK13-1Q9NX77 482 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 NPAP1Q9NZP6 1156 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 CNIH4Q9P003 139 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 ITGB1BP2Q9UKP3 347 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 MRPS2Q9Y399 296 aaKnown RBP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 DOCK9Q9BZ29 2069 aa8.02□□□□□ -1.12
SNRNP40-202ENST00000373720 TMEM131Q92545 1883 aa8.02□□□□□ -1.12
SNRNP40-202ENST00000373720 IGHV5-51A0A0C4DH38 117 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF860A6NHJ4 632 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 CENPBD1B2RD01 187 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 C17orf105B2RV13 164 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 FAM227AF5H4B4 570 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 PEX12O00623 359 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 SEC14L5O43304 696 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 WIPF1O43516 503 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 PLPP2O43688 288 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 OR2T1O43869 369 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 GATBO75879 557 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 ARL6IP5O75915 188 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 TXNDC12O95881 172 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 STATHP02808 62 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 THY1P04216 161 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 CELA2BP08218 269 aaPredicted RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 TACSTD2P09758 323 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 LIMS3P0CW19 117 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 LIMS4P0CW20 117 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 PGCP20142 388 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 FBLP22087 321 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 HTR2AP28223 471 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 SDC2P34741 201 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 MTNR1BP49286 362 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC25A1P53007 311 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 NRG3P56975 720 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 RPS4XP62701 263 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 RIN1Q13671 783 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 EXOSC7Q15024 291 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 PON3Q15166 354 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF542PQ5EBM4 170 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC6A19Q695T7 634 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC30A6Q6NXT4 461 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 FIGNL1Q6PIW4 674 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF322Q6U7Q0 402 aaPredicted RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 PRSS41Q7RTY9 318 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 DND1Q8IYX4 353 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 OR4D9Q8NGE8 314 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 OR5L2Q8NGL0 311 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 OR8D4Q8NGM9 314 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 OR1N1Q8NGS0 311 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 C15orf40Q8WUR7 153 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 RPL3LQ92901 407 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 C1GALT1C1Q96EU7 318 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 SAMD8Q96LT4 415 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 SECISBP2Q96T21 854 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 TEAD3Q99594 435 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 RHNO1Q9BSD3 238 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 CENPOQ9BU64 300 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms