RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 IKZF5Q9H5V7 419 aa10.81□□□□□ -0.68
HDAC8-201ENST00000373554 ARMC7Q9H6L4 198 aa10.81□□□□□ -0.68
HDAC8-201ENST00000373554 BCL2L10Q9HD36 194 aa10.81□□□□□ -0.68
HDAC8-201ENST00000373554 SERINC1Q9NRX5 453 aa10.81□□□□□ -0.68
HDAC8-201ENST00000373554 DNAJB12Q9NXW2 375 aaKnown RBP10.81□□□□□ -0.68
HDAC8-201ENST00000373554 MCTS1Q9ULC4 181 aaKnown RBP10.81□□□□□ -0.68
HDAC8-201ENST00000373554 ZNF232Q9UNY5 417 aa10.81□□□□□ -0.68
HDAC8-201ENST00000373554 ZNF443Q9Y2A4 671 aaPredicted RBP10.81□□□□□ -0.68
HDAC8-201ENST00000373554 CAPN7Q9Y6W3 813 aa10.81□□□□□ -0.68
HDAC8-201ENST00000373554 CACNA1CQ13936 2221 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 CDHR4A6H8M9 788 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 EEF1E1-BLOC1S5C9J1V9 151 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 TNFSF11O14788 317 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 SLC22A2O15244 555 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 EEF1E1O43324 174 aaKnown RBP10.8□□□□□ -0.68
HDAC8-201ENST00000373554 CXCL13O43927 109 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 BCAS1O75363 584 aaPredicted RBP10.8□□□□□ -0.68
HDAC8-201ENST00000373554 SYNGR4O95473 234 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 NTN1O95631 604 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 TGM6O95932 706 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 CRHP06850 196 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 ARAFP10398 606 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 IL11P20809 199 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 MTPNP58546 118 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 CDK6Q00534 326 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 PLAURQ03405 335 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 TFF3Q07654 80 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 MERTKQ12866 999 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 CYP51A1Q16850 503 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 CTU2Q2VPK5 515 aaKnown RBP10.8□□□□□ -0.68
HDAC8-201ENST00000373554 TRMT5Q32P41 509 aaKnown RBP10.8□□□□□ -0.68
HDAC8-201ENST00000373554 RUNDC3AQ59EK9 446 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 COQ5Q5HYK3 327 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 HBMQ6B0K9 141 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 REEP3Q6NUK4 255 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 POMZP3Q6PJE2 187 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 ZNF836Q6ZNA1 936 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 GRINAQ7Z429 371 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 SPATA21Q7Z572 469 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 VRK2Q86Y07 508 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 KRT73Q86Y46 540 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 ZNF440Q8IYI8 595 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 ATP6V1C2Q8NEY4 427 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 NFKBIDQ8NI38 313 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 SLC25A43Q8WUT9 341 aaPredicted RBP10.8□□□□□ -0.68
HDAC8-201ENST00000373554 FIG4Q92562 907 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 MARVELD3Q96A59 401 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 ADGRG7Q96K78 797 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 CGREF1Q99674 301 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 FAM107BQ9H098 131 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 TMEM38AQ9H6F2 299 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 RNF122Q9H9V4 155 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 TIGARQ9NQ88 270 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 NPDC1Q9NQX5 325 aaPredicted RBP10.8□□□□□ -0.68
HDAC8-201ENST00000373554 ACER3Q9NUN7 267 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 IFT52Q9Y366 437 aa10.8□□□□□ -0.68
HDAC8-201ENST00000373554 SPIN1Q9Y657 262 aaPredicted RBP10.8□□□□□ -0.68
HDAC8-201ENST00000373554 KIAA1549Q9HCM3 1950 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 A0A0J9YW62 118 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 CFAP73A6NFT4 308 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 MRASO14807 208 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 CCDC22O60826 627 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 PGM3O95394 542 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 PLGP00747 810 aaPredicted RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 PABPC4LP0CB38 370 aaKnown RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 ETS2P15036 469 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 SLC6A2P23975 617 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 LSP1P33241 339 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 APOBEC1P41238 236 aaKnown RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 HTR3AP46098 478 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 IDH2P48735 452 aaKnown RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 AGFG1P52594 562 aaKnown RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 SEC24CP53992 1094 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 FOXF2Q12947 444 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 CYLC2Q14093 348 aaPredicted RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 SCARB2Q14108 478 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 TMEM176BQ3YBM2 270 aaPredicted RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 ZNF311Q5JNZ3 666 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 REP15Q6BDI9 236 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 MEX3BQ6ZN04 569 aaKnown RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 PLEKHM3Q6ZWE6 761 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 SNX32Q86XE0 403 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 C10orf111Q8N326 155 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 CNEP1R1Q8N9A8 125 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 PCYOX1LQ8NBM8 494 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 CPNE4Q96A23 557 aaPredicted RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 REXO5Q96IC2 774 aaKnown RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 SPOCK3Q9BQ16 436 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 ELAC2Q9BQ52 826 aaKnown RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 SPATA5L1Q9BVQ7 753 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 SPATA9Q9BWV2 254 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 ENKD1Q9H0I2 346 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 PIGMQ9H3S5 423 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 RLIMQ9NVW2 624 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 ARMCX1Q9P291 453 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 FOXD3Q9UJU5 478 aaPredicted RBP10.79□□□□□ -0.68
HDAC8-201ENST00000373554 PACSIN3Q9UKS6 424 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 ANGPT4Q9Y264 503 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 PCNX3Q9H6A9 2034 aa10.79□□□□□ -0.68
HDAC8-201ENST00000373554 LOC100653049A0A140TA62 436 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms