RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 FCGR2AP12318 317 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 ANXA11P50995 505 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 STX1BP61266 288 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 HPCAP84074 193 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 ZNF117Q03924 483 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 VEZF1Q14119 521 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 GUSBP1Q15486 140 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 ETFDHQ16134 617 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 SGCBQ16585 318 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 TMEM44Q2T9K0 475 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 PLPPR5Q32ZL2 321 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 ARHGAP11BQ3KRB8 267 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 KLHL26Q53HC5 615 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 MIER2Q8N344 545 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 MAPK1IP1LQ8NDC0 245 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 NMUR2Q9GZQ4 415 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 FANCFQ9NPI8 374 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 TCF7L2Q9NQB0 619 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 PLSCR4Q9NRQ2 329 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 MED17Q9NVC6 651 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 EMC9Q9Y3B6 208 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 DTNAQ9Y4J8 743 aa17.14■□□□□ 0.33
TRAPPC3-204ENST00000373166 C7orf72A4D263 438 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 SHISA8B8ZZ34 492 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 NPIPB9F8W1W9 429 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 GTPBP1O00178 669 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 NUDT14O95848 222 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 PLAUP00749 431 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 OR12D1P0DN82 309 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 RNF144AP50876 292 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 SUMO3P55854 103 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 CLDN20P56880 219 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 RPS4XP62701 263 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 TXNL4AP83876 142 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 GPR68Q15743 365 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 PHC2Q8IXK0 858 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 GTPBP8Q8N3Z3 284 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 TMCO5AQ8N6Q1 288 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 XAGE5Q8WWM1 108 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 TRMT61AQ96FX7 289 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 PLPPR2Q96GM1 343 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 INPP5KQ9BT40 448 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 PRRG4Q9BZD6 226 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 ZNF350Q9GZX5 532 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 RMND5AQ9H871 391 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 LAMP3Q9UQV4 416 aa17.13■□□□□ 0.33
TRAPPC3-204ENST00000373166 RFXANKO14593 260 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 TLX2O43763 284 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 SASH3O75995 380 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 PLGP00747 810 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 UBL4AP11441 157 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 CDKN2CP42773 168 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 P2RX1P51575 399 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 TIGD2Q4W5G0 525 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 PDZK1Q5T2W1 519 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 DNAJC14Q6Y2X3 702 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 STAC2Q6ZMT1 411 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 ZNF621Q6ZSS3 439 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 MSANTD1Q6ZTZ1 278 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 RNF130Q86XS8 419 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 METTL25Q8N6Q8 603 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 OR6K3Q8NGY3 331 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 TMEM158Q8WZ71 300 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 RAB8BQ92930 207 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 TMEM204Q9BSN7 226 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 REG4Q9BYZ8 158 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 POLE3Q9NRF9 147 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 MKLN1Q9UL63 735 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 CARD8Q9Y2G2 431 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 WDR45Q9Y484 360 aa17.12■□□□□ 0.33
TRAPPC3-204ENST00000373166 RAI1Q7Z5J4 1906 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 KIAA0513O60268 411 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 FCMRO60667 390 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 AQP8O94778 261 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 ANP32DO95626 131 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 GSNP06396 782 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 ME2P23368 584 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 IDUAP35475 653 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 EIF1P41567 113 aaKnown RBP17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 POLR2JP52435 117 aaKnown RBP17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 AQP5P55064 265 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 CTBP2P56545 445 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 ZNF141Q15928 474 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 PPP4R4Q6NUP7 873 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 HIPK1Q86Z02 1210 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 WFDC8Q8IUA0 241 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 TOR1AIP2Q8NFQ8 470 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 CKAP2Q8WWK9 683 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 OIT3Q8WWZ8 545 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 AKAP1Q92667 903 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 ROPN1LQ96C74 230 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 MAGEB18Q96M61 343 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 RNF145Q96MT1 663 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 CCDC28BQ9BUN5 200 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 ICAM5Q9UMF0 924 aa17.11■□□□□ 0.33
TRAPPC3-204ENST00000373166 FAM234BA2RU67 622 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 SERINC4A6NH21 518 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 EIF1AYO14602 144 aaKnown RBP17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 ZNF264O43296 627 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms