RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 FAF1Q9UNN5 650 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC3-201ENST00000373159 MGAT4BQ9UQ53 548 aa11.55□□□□□ -0.56
TRAPPC3-201ENST00000373159 DNAJC15Q9Y5T4 150 aa11.55□□□□□ -0.56
TRAPPC3-201ENST00000373159 KCNE3Q9Y6H6 103 aa11.55□□□□□ -0.56
TRAPPC3-201ENST00000373159 NPIPA5A0A0B4J1W7 369 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 E7EQL1 145 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 NPIPA7E9PJI5 369 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 ZNF264O43296 627 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 CHEK2O96017 543 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 FGF4P08620 206 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 NPIPA8P0DM63 369 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 LAMP1P11279 417 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 PTNP21246 168 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 PTAFRP25105 342 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 RPL3P39023 403 aaKnown RBP11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 RNF144AP50876 292 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 NUDT6P53370 316 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 VLDLRP98155 873 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 CBFBQ13951 182 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 PDK3Q15120 406 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 QPRTQ15274 297 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 RAB35Q15286 201 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 NDUFAF6Q330K2 333 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 TIGD2Q4W5G0 525 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 KANK2Q63ZY3 851 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 CLEC2AQ6UVW9 174 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 TMEM108Q6UXF1 575 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 TMPPEQ6ZT21 453 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 IFT20Q8IY31 132 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 ZNF100Q8IYN0 542 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 NATD1Q8N6N6 113 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 OR7A2PQ8NGA2 310 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 ZNF300Q96RE9 604 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 CACNG6Q9BXT2 260 aa11.54□□□□□ -0.56
TRAPPC3-201ENST00000373159 NUP214P35658 2090 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 IGKV3D-15A0A087WSY6 115 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 TMEM114B3SHH9 223 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 SCAMP2O15127 329 aaKnown RBP11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 H6PDO95479 791 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 SLC25A16P16260 332 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 THBS2P35442 1172 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 HPCAL1P37235 193 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 TP53BP2Q13625 1128 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 LSM12Q3MHD2 195 aaKnown RBP11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 UGT3A2Q3SY77 523 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 GALNTL6Q49A17 601 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 FBXW9Q5XUX1 488 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 C3orf33Q6P1S2 294 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 MTDHQ86UE4 582 aaKnown RBP11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 CCDC63Q8NA47 563 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 OR2W6PQ8NHA6 318 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 RFWD2Q8NHY2 731 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 ST8SIA1Q92185 356 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 COQ8BQ96D53 544 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 OR5B2Q96R09 309 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 KCNK17Q96T54 332 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 SDF2Q99470 211 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 GATA5Q9BWX5 397 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 BEX2Q9BXY8 128 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 NMUR2Q9GZQ4 415 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 LAT2Q9GZY6 243 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 C12orf65Q9H3J6 166 aaKnown RBP11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 SERINC1Q9NRX5 453 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 FIS1Q9Y3D6 152 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 SVEP1Q4LDE5 3571 aa11.53□□□□□ -0.56
TRAPPC3-201ENST00000373159 ANK2Q01484 3957 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 SERINC4A6NH21 518 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 H7C417 338 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 SULT2B1O00204 365 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 TRIM13O60858 407 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 LYPLA1O75608 230 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 FAM153BP0C7A2 387 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 DHRS4L1P0CG22 281 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 UBL4AP11441 157 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 CD40P25942 277 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 MAPK1P28482 360 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 DIO1P49895 249 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 SESN3P58005 492 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 CSNK2A1P68400 391 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 SKP2Q13309 424 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 ZNF141Q15928 474 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 FAM153CQ494X1 144 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 SPDYE7PQ495Y7 208 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 SLC22A25Q6T423 547 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 KLHL17Q6TDP4 642 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 C10orf107Q8IVU9 208 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 FBXL14Q8N1E6 418 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 PIAS4Q8N2W9 510 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 MUC15Q8N387 334 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 ZNF614Q8N883 585 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 SFXN5Q8TD22 340 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 PROX1Q92786 737 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 MOAP1Q96BY2 351 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 PPP3R2Q96LZ3 170 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 MUS81Q96NY9 551 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 THUMPD3Q9BV44 507 aaKnown RBP11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 QRSL1Q9H0R6 528 aaKnown RBP11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 ACER3Q9NUN7 267 aa11.52□□□□□ -0.57
TRAPPC3-201ENST00000373159 ATAD3AQ9NVI7 634 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms