RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 NPIPA7E9PJI5 369 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 SLC16A7O60669 478 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 NPIPA8P0DM63 369 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 HOXA11P31270 313 aaPredicted RBP10.82□□□□□ -0.68
VCL-202ENST00000372755 CSNK1DP48730 415 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 SLC14A1Q13336 389 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 SLC35F3Q8IY50 421 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 SGK3Q96BR1 496 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 ZNF286AQ9HBT8 521 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 SLC6A20Q9NP91 592 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 CDHR4A6H8M9 788 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 SLC9B1P1A6NJY1 282 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 GALR3O60755 368 aaPredicted RBP10.81□□□□□ -0.68
VCL-202ENST00000372755 CER1O95813 267 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 CBX7O95931 251 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 IL2RGP31785 369 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 VEGFCP49767 419 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 CXCR4P61073 352 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 AARDQ4LEZ3 155 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 ACTBL2Q562R1 376 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.81□□□□□ -0.683e-7■■■■□ 23.7
VCL-202ENST00000372755 HSD11B1LQ7Z5J1 315 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 GPR26Q8NDV2 337 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 NGBQ9NPG2 151 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 WASH4PA8MWX3 477 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 SLC43A1O75387 559 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 IL4RP24394 825 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 SSX2Q16385 188 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 PGGHGQ32M88 737 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 SMIM15Q7Z3B0 74 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 OR4N2Q8NGD1 307 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 OR11L1Q8NGX0 322 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 CENPOQ9BU64 300 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 ZNF436Q9C0F3 470 aaPredicted RBP10.81□□□□□ -0.68
VCL-202ENST00000372755 NOX3Q9HBY0 568 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 UBQLN4Q9NRR5 601 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 STARD5Q9NSY2 213 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 MYOTQ9UBF9 498 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 TMEM269A0A1B0GVZ9 245 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 DPM1O60762 260 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 RAB6AP20340 208 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 SERPINA2P20848 420 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 VASPP50552 380 aaPredicted RBP10.81□□□□□ -0.68
VCL-202ENST00000372755 NKX2-5P52952 324 aaPredicted RBP10.81□□□□□ -0.68
VCL-202ENST00000372755 CXADRP78310 365 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 LTB4RQ15722 352 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 LCN10Q6JVE6 187 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 NAT6Q93015 286 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 MIB2Q96AX9 1013 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 TUBG2Q9NRH3 451 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 CPNE7Q9UBL6 633 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 FANCGO15287 622 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 FRS3O43559 492 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 LDB3O75112 727 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 CHRM4P08173 479 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 RAB40ALP0C0E4 278 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 UBBP0CG47 229 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 UBCP0CG48 685 aaKnown RBP10.81□□□□□ -0.68
VCL-202ENST00000372755 CD46P15529 392 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 INHBCP55103 352 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 RPS27AP62979 156 aaKnown RBP10.81□□□□□ -0.68
VCL-202ENST00000372755 UBA52P62987 128 aaKnown RBP10.81□□□□□ -0.68
VCL-202ENST00000372755 GPR18Q14330 331 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 SLC22A6Q4U2R8 563 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 UBE2NLQ5JXB2 153 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 CNEP1R1Q8N9A8 125 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 RAB40AQ8WXH6 277 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 PSMF1Q92530 271 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 MUL1Q969V5 352 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 OR7D2Q96RA2 312 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 OR51B6Q9H340 312 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 CAMK2AQ9UQM7 478 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 DRGXA6NNA5 263 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 HIDE1A8MVS5 230 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 AGPAT2O15120 278 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 TNFSF12O43508 249 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 GPX3P22352 226 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 IL32P24001 234 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 OPRL1P41146 370 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 ZNF92Q03936 586 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 CATR1Q13166 79 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 BATFQ16520 125 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 ENTPD8Q5MY95 495 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 BRICD5Q6PL45 260 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 TP53INP2Q8IXH6 220 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 DRAXINQ8NBI3 349 aaPredicted RBP10.81□□□□□ -0.68
VCL-202ENST00000372755 MDGA1Q8NFP4 955 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 ELP4Q96EB1 424 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 ULBP2Q9BZM5 246 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 LINC00597Q9H2U6 94 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 NT5DC2Q9H857 520 aa10.81□□□□□ -0.68
VCL-202ENST00000372755 TSPAN11A1L157 253 aa10.8□□□□□ -0.68
VCL-202ENST00000372755 GABRR3A8MPY1 467 aa10.8□□□□□ -0.68
VCL-202ENST00000372755 SNAPINO95295 136 aa10.8□□□□□ -0.68
VCL-202ENST00000372755 FOSL1P15407 271 aa10.8□□□□□ -0.68
VCL-202ENST00000372755 NTHL1P78549 312 aa10.8□□□□□ -0.68
VCL-202ENST00000372755 SIX1Q15475 284 aaPredicted RBP10.8□□□□□ -0.68
VCL-202ENST00000372755 C1orf220Q5T0J3 134 aa10.8□□□□□ -0.68
VCL-202ENST00000372755 LRRC28Q86X40 367 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms