RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 NFAT5O94916 1531 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 ANXA7P20073 488 aaKnown RBP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 HNRNPA2B1P22626 353 aaKnown RBP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 PER3P56645 1201 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 OLIG2Q13516 323 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 ABHD15Q6UXT9 468 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 CACNA1SQ13698 1873 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 PFKMP08237 780 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 BMP1P13497 986 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 LRRC26Q2I0M4 334 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 TP53I3Q53FA7 332 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 SHEQ5VZ18 495 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 FIGNL1Q6PIW4 674 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 APH1BQ8WW43 257 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 SEC22AQ96IW7 307 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 SIDT1Q9NXL6 827 aaKnown RBP14.38□□□□□ -0.11
COL5A1-201ENST00000371817 RPH3ALQ9UNE2 315 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 TMEM98Q9Y2Y6 226 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 CSNK1G3Q9Y6M4 447 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 CXCL14O95715 111 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 TMEM35AQ53FP2 167 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 DPPA4Q7L190 304 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 IMP4Q96G21 291 aaKnown RBP14.38□□□□□ -0.11
COL5A1-201ENST00000371817 PRRC1Q96M27 445 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 CD1DP15813 335 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 GUK1Q16774 197 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 LBHQ53QV2 105 aaPredicted RBP14.38□□□□□ -0.11
COL5A1-201ENST00000371817 ADGRF3Q8IZF5 1079 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 TPPP3Q9BW30 176 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 SEMA4CQ9C0C4 833 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 SLC2A9Q9NRM0 540 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 CLCF1Q9UBD9 225 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 A6NIZ1 184 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 TCRBP04435 133 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 CTXN1P60606 82 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 RAP1BP61224 184 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 PRR11Q96HE9 360 aaPredicted RBP14.38□□□□□ -0.11
COL5A1-201ENST00000371817 CWH43Q9H720 699 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 PCDHAC2Q9Y5I4 1007 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 PTAFRP25105 342 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 RPS19P39019 145 aaKnown RBP14.38□□□□□ -0.11
COL5A1-201ENST00000371817 FAM162BQ5T6X4 162 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 SLX4IPQ5VYV7 408 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 FCRLAQ7L513 359 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 NHLRC2Q8NBF2 726 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 SLC24A4Q8NFF2 622 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 FBXO27Q8NI29 283 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 SLC16A10Q8TF71 515 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 GJD4Q96KN9 370 aaPredicted RBP14.38□□□□□ -0.11
COL5A1-201ENST00000371817 OR1F2PQ96R84 312 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 ATXN7L1Q9ULK2 861 aaPredicted RBP14.38□□□□□ -0.11
COL5A1-201ENST00000371817 TUBAL3A6NHL2 446 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 HIDE1A8MVS5 230 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 DVL1O14640 695 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 UBL3O95164 117 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 CD63P08962 238 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 CTRB1P17538 263 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 LMO2P25791 158 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 DVL1P1P54792 670 aaPredicted RBP14.38□□□□□ -0.11
COL5A1-201ENST00000371817 CTRB2Q6GPI1 263 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 MAMDC2Q7Z304 686 aaPredicted RBP14.38□□□□□ -0.11
COL5A1-201ENST00000371817 CABLES2Q9BTV7 478 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 SEMA6CQ9H3T2 930 aa14.38□□□□□ -0.11
COL5A1-201ENST00000371817 MYBPHLA2RUH7 354 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 CCL16O15467 120 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 NCR1O76036 304 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 MPEG1Q2M385 716 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 IL20RBQ6UXL0 311 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 GORASP2Q9H8Y8 452 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 SCPEP1Q9HB40 452 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 ZNF629Q9UEG4 869 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 RIMS3Q9UJD0 308 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 I6L893 689 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 TNFRSF1BP20333 461 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 PREPP48147 710 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 FXNQ16595 210 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 GLIS1Q8NBF1 620 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 DNAJA3Q96EY1 480 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 B4DXG7 233 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 GDNFP39905 211 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 EFNA3P52797 238 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 LRRTM1Q86UE6 522 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 PPP1R3BQ86XI6 285 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 CLDN22Q8N7P3 220 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 KCTD13Q8WZ19 329 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 ZMYND19Q96E35 227 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 SAT2Q96F10 170 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 P2RX7Q99572 595 aaKnown RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 C11orf54Q9H0W9 315 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 YTHDF2Q9Y5A9 579 aaKnown RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 G3V3Q6 166 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 ID2Q02363 134 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 MAP2K5Q13163 448 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 FCN2Q15485 313 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 GLYR1Q49A26 553 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 GTDC1Q4AE62 458 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 UNC50Q53HI1 259 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 TXNRD3NBQ6F5E7 133 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 ARHGDIGQ99819 225 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms