RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 SNAPC1Q16533 368 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 PGGHGQ32M88 737 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 RAB11FIP2Q7L804 512 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 CDK20Q8IZL9 346 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 TMCO5AQ8N6Q1 288 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 OR13C2Q8NGS9 318 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 TMEM163Q8TC26 289 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 FANK1Q8TC84 345 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 LIN37Q96GY3 246 aaPredicted RBP16.04■□□□□ 0.16
SSBP3-203ENST00000371319 OR52D1Q9H346 318 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 ACOT13Q9NPJ3 140 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 TOR4AQ9NXH8 423 aa16.04■□□□□ 0.16
SSBP3-203ENST00000371319 CNOT2Q9NZN8 540 aaKnown RBP16.04■□□□□ 0.16
SSBP3-203ENST00000371319 SPEGQ15772 3267 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-203ENST00000371319 EFCAB10A6NFE3 127 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 EFCAB9A8MZ26 197 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 GNB5O14775 395 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 PTP4A3O75365 173 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 CSO75390 466 aaKnown RBP16.03■□□□□ 0.16
SSBP3-203ENST00000371319 STK17BO94768 372 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 ADRA2AP08913 450 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 PIPP12273 146 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-203ENST00000371319 MST1P26927 711 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 ACVR2AP27037 513 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 C21orf33P30042 268 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-203ENST00000371319 EVI2BP34910 448 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 CCR4P51679 360 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 IRF3Q14653 427 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 GPR107Q5VW38 600 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 SLC30A6Q6NXT4 461 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 ATG4DQ86TL0 474 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-203ENST00000371319 THAP3Q8WTV1 239 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-203ENST00000371319 HGDQ93099 445 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 ISOC1Q96CN7 298 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 ZNF582Q96NG8 517 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-203ENST00000371319 TAAR9Q96RI9 348 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 CCNL2Q96S94 520 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-203ENST00000371319 TBL1XR1Q9BZK7 514 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 ENKD1Q9H0I2 346 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 ZNF700Q9H0M5 742 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 ZBTB20Q9HC78 741 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-203ENST00000371319 HHATLQ9HCP6 504 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 PARD6AQ9NPB6 346 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 PISDQ9UG56 409 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 SIGLEC7Q9Y286 467 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 FRYLO94915 3013 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 DMDP11532 3685 aa16.03■□□□□ 0.16
SSBP3-203ENST00000371319 IGKV1D-42A0A075B6H8 117 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 IGHV1-45A0A0A0MS14 117 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 A0A1W2PNU3 283 aaPredicted RBP16.02■□□□□ 0.16
SSBP3-203ENST00000371319 ENO4A6NNW6 628 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 WWP2O00308 870 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 SURF4O15260 269 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 NDUFB5O43674 189 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 EIF4E2O60573 245 aaKnown RBP16.02■□□□□ 0.16
SSBP3-203ENST00000371319 ZFAND5O76080 213 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 DLGAP3O95886 979 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 SLC6A8P48029 635 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 MLLT10P55197 1068 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 ST3GAL4Q11206 333 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 FHL1Q13642 323 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 EFR3AQ14156 821 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 SYT14P1Q58G82 188 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 MEDAGQ5VYS4 303 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 LYPD8Q6UX82 237 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 CCDC81Q6ZN84 652 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 STX19Q8N4C7 294 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 OR5L2Q8NGL0 311 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 OR2Y1Q8NGV0 311 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 SH3YL1Q96HL8 342 aaPredicted RBP16.02■□□□□ 0.16
SSBP3-203ENST00000371319 SLC38A2Q96QD8 506 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 ZPBPQ9BS86 351 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 DDA1Q9BW61 102 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 NAA50Q9GZZ1 169 aaKnown RBP16.02■□□□□ 0.16
SSBP3-203ENST00000371319 UBQLN3Q9H347 655 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 IL20RAQ9UHF4 553 aa16.02■□□□□ 0.16
SSBP3-203ENST00000371319 ZNF701M0R085 212 aaPredicted RBP16.01■□□□□ 0.15
SSBP3-203ENST00000371319 MT-CO3P00414 261 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 COX6A1P12074 109 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 ENDOUP21128 410 aaKnown RBP16.01■□□□□ 0.15
SSBP3-203ENST00000371319 GSTT1P30711 240 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 FBXW4P57775 412 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 ZNF91Q05481 1191 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 CRYZQ08257 329 aaKnown RBP16.01■□□□□ 0.15
SSBP3-203ENST00000371319 CSRP2Q16527 193 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 SYT6Q5T7P8 510 aaPredicted RBP16.01■□□□□ 0.15
SSBP3-203ENST00000371319 UBE2UQ5VVX9 321 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 RPL13AP3Q6NVV1 102 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 TIPARPQ7Z3E1 657 aaKnown RBP16.01■□□□□ 0.15
SSBP3-203ENST00000371319 OR2T33Q8NG76 320 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 ZNF420Q8TAQ5 688 aaPredicted RBP16.01■□□□□ 0.15
SSBP3-203ENST00000371319 ELP5Q8TE02 316 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 RNF138Q8WVD3 245 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 RORBQ92753 470 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 LRR1Q96L50 414 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 DOK1Q99704 481 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 PRRG3Q9BZD7 231 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 SPRY4Q9C004 299 aa16.01■□□□□ 0.15
SSBP3-203ENST00000371319 RPL36Q9Y3U8 105 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms