RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 PGGHGQ32M88 737 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 ANKRD46Q86W74 232 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 RIBC1Q8N443 379 aaPredicted RBP11.66□□□□□ -0.54
RPF1-201ENST00000370654 ZNF781Q8N8C0 355 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 STEAP2Q8NFT2 490 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 AENQ8WTP8 325 aaKnown RBP11.66□□□□□ -0.54
RPF1-201ENST00000370654 RAB8BQ92930 207 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 REXO5Q96IC2 774 aaKnown RBP11.66□□□□□ -0.54
RPF1-201ENST00000370654 OR5B2Q96R09 309 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 LAT2Q9GZY6 243 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 AKTIPQ9H8T0 292 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 BCO1Q9HAY6 547 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 ATAD3AQ9NVI7 634 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 NPAP1Q9NZP6 1156 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 RNF115Q9Y4L5 304 aa11.66□□□□□ -0.54
RPF1-201ENST00000370654 MAGED1Q9Y5V3 778 aaPredicted RBP11.66□□□□□ -0.54
RPF1-201ENST00000370654 RNF103-CHMP3A0A140T963 221 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 CLDN24A6NM45 220 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 H3BNH8 94 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 EIF4E2O60573 245 aaKnown RBP11.65□□□□□ -0.55
RPF1-201ENST00000370654 CYTIPO60759 359 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 CD8AP01732 235 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 UBTFL6P0CB48 400 aaPredicted RBP11.65□□□□□ -0.55
RPF1-201ENST00000370654 OR12D1P0DN82 309 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 IGHV1-2P23083 117 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 IL32P24001 234 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 OR3A2P47893 321 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 RAC3P60763 192 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 EMX2Q04743 252 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 BSPH1Q075Z2 132 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 ADAM5Q6NVV9 412 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 BHLHA15Q7RTS1 189 aaPredicted RBP11.65□□□□□ -0.55
RPF1-201ENST00000370654 PIWIL2Q8TC59 973 aaKnown RBP11.65□□□□□ -0.55
RPF1-201ENST00000370654 KISS1RQ969F8 398 aaPredicted RBP11.65□□□□□ -0.55
RPF1-201ENST00000370654 TACO1Q9BSH4 297 aaKnown RBP11.65□□□□□ -0.55
RPF1-201ENST00000370654 HDHD5Q9BXW7 423 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 NMUR2Q9GZQ4 415 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 ZNF350Q9GZX5 532 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 OR51I1Q9H343 314 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 CXorf56Q9H5V9 222 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 TIGARQ9NQ88 270 aa11.65□□□□□ -0.55
RPF1-201ENST00000370654 GJE1A6NN92 205 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 RNF223E7ERA6 249 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 ANKRD28O15084 1053 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 IGHV3-9P01782 118 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 FESP07332 822 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 THBS1P07996 1170 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 KRT16P08779 473 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 PABPC4LP0CB38 370 aaKnown RBP11.64□□□□□ -0.55
RPF1-201ENST00000370654 SLC7A1P30825 629 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 PGM1P36871 562 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 SERPINB5P36952 375 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 FOXG1P55316 489 aaPredicted RBP11.64□□□□□ -0.55
RPF1-201ENST00000370654 RPS4XP62701 263 aaKnown RBP11.64□□□□□ -0.55
RPF1-201ENST00000370654 RASGEF1BQ0VAM2 473 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 ITGADQ13349 1161 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 CBFBQ13951 182 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 ARHGAP11BQ3KRB8 267 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 ZNF672Q499Z4 452 aaPredicted RBP11.64□□□□□ -0.55
RPF1-201ENST00000370654 TYW3Q6IPR3 259 aaKnown RBP11.64□□□□□ -0.55
RPF1-201ENST00000370654 HEPHL1Q6MZM0 1159 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 TNFAIP8L2Q6P589 184 aaPredicted RBP11.64□□□□□ -0.55
RPF1-201ENST00000370654 TOR1AIP2Q8NFQ8 470 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 OR4A15Q8NGL6 344 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 SMAP2Q8WU79 429 aaPredicted RBP11.64□□□□□ -0.55
RPF1-201ENST00000370654 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.64□□□□□ -0.55
RPF1-201ENST00000370654 HSD17B8Q92506 261 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 MOAP1Q96BY2 351 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 SLC35G5Q96KT7 338 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 SORT1Q99523 831 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 PRPF18Q99633 342 aaKnown RBP11.64□□□□□ -0.55
RPF1-201ENST00000370654 TRIM2Q9C040 744 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 GP6Q9HCN6 339 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 ASIC5Q9NY37 505 aa11.64□□□□□ -0.55
RPF1-201ENST00000370654 GDF2Q9UK05 429 aaPredicted RBP11.64□□□□□ -0.55
RPF1-201ENST00000370654 HIVEP2P31629 2446 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 CR1P17927 2039 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 SHISA9B4DS77 424 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 STX11O75558 287 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 CPSF4O95639 269 aaKnown RBP11.63□□□□□ -0.55
RPF1-201ENST00000370654 CSTAP01040 98 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 IGHV4-39P01824 125 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 CD3EP07766 207 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 DDX5P17844 614 aaKnown RBP11.63□□□□□ -0.55
RPF1-201ENST00000370654 ACVR1BP36896 505 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 DIO1P49895 249 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 IFFO1Q0D2I5 559 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 MERTKQ12866 999 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 FAPQ12884 760 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 MPP2Q14168 576 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 CHI3L2Q15782 390 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 STK11Q15831 433 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 CLEC12BQ2HXU8 276 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 Q6ZT83 130 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 NUDCD3Q8IVD9 361 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 SLC43A2Q8N370 569 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 NATD1Q8N6N6 113 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 ARL5BQ96KC2 179 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 TEX37Q96LM6 180 aa11.63□□□□□ -0.55
RPF1-201ENST00000370654 ROPN1BQ9BZX4 212 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms