RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 GALNT5Q7Z7M9 940 aa13.49□□□□□ -0.25
SSR4-204ENST00000370087 WDR31Q8NA23 367 aa13.49□□□□□ -0.25
SSR4-204ENST00000370087 JADE3Q92613 823 aa13.49□□□□□ -0.25
SSR4-204ENST00000370087 OR5B2Q96R09 309 aa13.49□□□□□ -0.25
SSR4-204ENST00000370087 RHOXF2Q9BQY4 288 aa13.49□□□□□ -0.25
SSR4-204ENST00000370087 BTBD2Q9BX70 525 aa13.49□□□□□ -0.25
SSR4-204ENST00000370087 ADAM19Q9H013 955 aa13.49□□□□□ -0.25
SSR4-204ENST00000370087 SIRT3Q9NTG7 399 aaPredicted RBP13.49□□□□□ -0.25
SSR4-204ENST00000370087 KCNE3Q9Y6H6 103 aa13.49□□□□□ -0.25
SSR4-204ENST00000370087 CIB4A0PJX0 185 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 ATP6V1G2-DDX39BF2Z307 99 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 RSL1D1O76021 490 aaKnown RBP13.48□□□□□ -0.25
SSR4-204ENST00000370087 SLU7O95391 586 aaKnown RBP13.48□□□□□ -0.25
SSR4-204ENST00000370087 TGFAP01135 160 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 ATP5F1P24539 256 aaPredicted RBP13.48□□□□□ -0.25
SSR4-204ENST00000370087 SERPINB4P48594 390 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 SQLEQ14534 574 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 QPRTQ15274 297 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 GABRA6Q16445 453 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 FBXW9Q5XUX1 488 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 CDC73Q6P1J9 531 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 MTERF4Q7Z6M4 381 aaKnown RBP13.48□□□□□ -0.25
SSR4-204ENST00000370087 UBE2J2Q8N2K1 259 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 ANKS4BQ8N8V4 417 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 CLHC1Q8NHS4 586 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 RFWD2Q8NHY2 731 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 FAM76AQ8TAV0 307 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 FAM120BQ96EK7 910 aaKnown RBP13.48□□□□□ -0.25
SSR4-204ENST00000370087 DNAJA3Q96EY1 480 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 FOXN4Q96NZ1 517 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 PIMREGQ9BSJ6 248 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 STK38LQ9Y2H1 464 aa13.48□□□□□ -0.25
SSR4-204ENST00000370087 WBP11Q9Y2W2 641 aaKnown RBP13.48□□□□□ -0.25
SSR4-204ENST00000370087 IGKV3D-15A0A087WSY6 115 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 LRP5LA4QPB2 252 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 CCT8L1PA6NM43 557 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 ZNF716A6NP11 495 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 NPIPB9F8W1W9 429 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 ETV2O00321 342 aaPredicted RBP13.47□□□□□ -0.25
SSR4-204ENST00000370087 TCF21O43680 179 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 HMGN2P05204 90 aaKnown RBP13.47□□□□□ -0.25
SSR4-204ENST00000370087 SDC1P18827 310 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 GCAP28676 217 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 IL2RGP31785 369 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 DIO1P49895 249 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 PDE7AQ13946 482 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 LASP1Q14847 261 aaKnown RBP13.47□□□□□ -0.25
SSR4-204ENST00000370087 CARTPTQ16568 116 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 SWI5Q1ZZU3 235 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 C9orf135Q5VTT2 229 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 SSX8Q7RTT4 187 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 RFLNBQ8N5W9 214 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 TMCO5AQ8N6Q1 288 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 OR52E4Q8NGH9 312 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 PPCDCQ96CD2 204 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 FBXO17Q96EF6 278 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 ZNF764Q96H86 408 aaPredicted RBP13.47□□□□□ -0.25
SSR4-204ENST00000370087 TSSK3Q96PN8 268 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 BPESC1Q9GZL8 116 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 C12orf65Q9H3J6 166 aaKnown RBP13.47□□□□□ -0.25
SSR4-204ENST00000370087 ZNF180Q9UJW8 692 aa13.47□□□□□ -0.25
SSR4-204ENST00000370087 CENPVL1A0A0U1RR11 272 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 CCDC151A5D8V7 595 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 APOBEC3AP31941 199 aaPredicted RBP13.46□□□□□ -0.25
SSR4-204ENST00000370087 PHC1P78364 1004 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 CHRNB3Q05901 458 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 TIGD2Q4W5G0 525 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 C3orf33Q6P1S2 294 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 ZCCHC12Q6PEW1 402 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 C12orf54Q6X4T0 127 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 RELL1Q8IUW5 271 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 DEPDC4Q8N2C3 294 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 CCNYL1Q8N7R7 359 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 ZNF614Q8N883 585 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 EIF1ADQ8N9N8 165 aaKnown RBP13.46□□□□□ -0.25
SSR4-204ENST00000370087 OR2T11Q8NH01 316 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 ZFP28Q8NHY6 868 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 APH1AQ96BI3 265 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 CHMP6Q96FZ7 201 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 FCRL1Q96LA6 429 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 MUS81Q96NY9 551 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 PIGUQ9H490 435 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 REEP4Q9H6H4 257 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 DUSP22Q9NRW4 184 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 TAS2R16Q9NYV7 291 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 SH3BP4Q9P0V3 963 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 MALT1Q9UDY8 824 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 BAIAP2L1Q9UHR4 511 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 EMCNQ9ULC0 261 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 PMF1-BGLAPU3KQ54 211 aa13.46□□□□□ -0.25
SSR4-204ENST00000370087 PDLIM1O00151 329 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 GTPBP1O00178 669 aaKnown RBP13.45□□□□□ -0.26
SSR4-204ENST00000370087 NDUFS8O00217 210 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 TBX19O60806 448 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 SEC22BO75396 215 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 SNRPAP09012 282 aaKnown RBP13.45□□□□□ -0.26
SSR4-204ENST00000370087 ZNF23P17027 643 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 CCR4P51679 360 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 FAM174BQ3ZCQ3 159 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 DCST2Q5T1A1 773 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms