RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 NTN3O00634 580 aaPredicted RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 PCDH17O14917 1159 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 AGFG2O95081 481 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 H6PDO95479 791 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 IFNW1P05000 195 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 ALPLP05186 524 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 FESP07332 822 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 CHRM4P08173 479 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 ALOX5P09917 674 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 ACVR2AP27037 513 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 SYT16Q17RD7 645 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 ARHGAP11BQ3KRB8 267 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 IQCCQ4KMZ1 466 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 NHSL2Q5HYW2 709 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 OTUD3Q5T2D3 398 aaPredicted RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 TENM4Q6N022 2769 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 METTL27Q8N6F8 245 aaPredicted RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 SMYD1Q8NB12 490 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 WDR36Q8NI36 951 aaKnown RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 CPT1CQ8TCG5 803 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 MAGEE2Q8TD90 523 aaPredicted RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 SLC9A6Q92581 669 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 RIT1Q92963 219 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 ALOXE3Q9BYJ1 711 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 ANKRD60Q9BZ19 345 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 SLC7A5P2Q9GIP4 190 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 PIGUQ9H490 435 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 NDUFAF4Q9P032 175 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 RARRES3Q9UL19 164 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 PTPRQQ9UMZ3 2332 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 FAM32AQ9Y421 112 aaKnown RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 ORC6Q9Y5N6 252 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 MAU2Q9Y6X3 613 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 D6RAR5 112 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 PRAMEF2O60811 474 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 CDC123O75794 336 aaPredicted RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 HBQ1P09105 142 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 CT62P0C5K7 136 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 RRM2P31350 389 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 PPP2R2BQ00005 443 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 MERTKQ12866 999 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 ERV3-1Q14264 604 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 PDK3Q15120 406 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 ZNHIT3Q15649 155 aaPredicted RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 DUSP7Q16829 419 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 C6orf52Q5T4I8 152 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 MARCH9Q86YJ5 346 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 SLC16A11Q8NCK7 471 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 CHDHQ8NE62 594 aaPredicted RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 CCDC120Q96HB5 630 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 SLC46A1Q96NT5 459 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 ZNF300Q96RE9 604 aaPredicted RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 PINK1Q9BXM7 581 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 TP63Q9H3D4 680 aaPredicted RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 ANKRA2Q9H9E1 313 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 MKKSQ9NPJ1 570 aaPredicted RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 DHCR7Q9UBM7 475 aaKnown RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 C3orf18Q9UK00 162 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 SLC9A8Q9Y2E8 581 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 SH3GLB1Q9Y371 365 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 SAMHD1Q9Y3Z3 626 aaKnown RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 ENPP4Q9Y6X5 453 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 HECTD1Q9ULT8 2610 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 FER1L5A0AVI2 2057 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 MAGEA13PA6NCF6 341 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 A8MVJ9 347 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 H0YAE9 185 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 DYRK3O43781 588 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 SLC43A1O75387 559 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 ALPPP05187 535 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 PABPC4LP0CB38 370 aaKnown RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 THRBP10828 461 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 ACP2P11117 423 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 MAOAP21397 527 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 GDNFP39905 211 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 MAP3K8P41279 467 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 OR1D4P47884 311 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 IST1P53990 364 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 BTG2P78543 158 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 ZNF155Q12901 538 aaPredicted RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 TBR1Q16650 682 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 DUSP5Q16690 384 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 MLIPQ5VWP3 458 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 PLAG1Q6DJT9 500 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 CYP4Z1Q86W10 505 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 CHERPQ8IWX8 916 aaKnown RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 DHRSXQ8N5I4 330 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 COX18Q8N8Q8 333 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 OR52R1Q8NGF1 315 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 APOBEC4Q8WW27 367 aaKnown RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 TFAP2CQ92754 450 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 CDS1Q92903 461 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 OTUB1Q96FW1 271 aaPredicted RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 OR6C1Q96RD1 312 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 PIP5K1AQ99755 562 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 LMF2Q9BU23 707 aaKnown RBP8.05□□□□□ -1.12
TPM3-213ENST00000368545 SLC38A1Q9H2H9 487 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 POLE3Q9NRF9 147 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 IFT52Q9Y366 437 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 CLDN16Q9Y5I7 305 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms