RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 RFPL3O75679 317 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 FOLR1P15328 257 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 ZNF3P17036 446 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 FBLP22087 321 aaKnown RBP12.74□□□□□ -0.37
SHC1-202ENST00000368445 ACVR1BP36896 505 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 NXPH1P58417 271 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 FOXK2Q01167 660 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 IFITM3Q01628 133 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 MLLT11Q13015 90 aaPredicted RBP12.74□□□□□ -0.37
SHC1-202ENST00000368445 KIRREL2Q6UWL6 708 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 FAM131AQ6UXB0 335 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 ZNF550Q7Z398 422 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 PARP16Q8N5Y8 322 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 TM9SF4Q92544 642 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 PRSS27Q9BQR3 290 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 TAPBPLQ9BX59 468 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 HCAR1Q9BXC0 346 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 NXF5Q9H1B4 397 aaKnown RBP12.74□□□□□ -0.37
SHC1-202ENST00000368445 FLRT3Q9NZU0 649 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 EXOSC1Q9Y3B2 195 aaKnown RBP12.74□□□□□ -0.37
SHC1-202ENST00000368445 IER3IP1Q9Y5U9 82 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 TTC28Q96AY4 2481 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 ZNF749O43361 778 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 GRPRP30550 384 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 HCCSP53701 268 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 RELAQ04206 551 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 TMEM201Q5SNT2 666 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 NPSR1Q6W5P4 371 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 ATP6V1C2Q8NEY4 427 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 C14orf105Q9NVL8 296 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 FAIMQ9NVQ4 179 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 TXNL4BQ9NX01 149 aaKnown RBP12.74□□□□□ -0.37
SHC1-202ENST00000368445 NTMQ9P121 344 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 CLEC4AQ9UMR7 237 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 ADAM18Q9Y3Q7 739 aa12.74□□□□□ -0.37
SHC1-202ENST00000368445 PSMD9O00233 223 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 SCO2O43819 266 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 AKAP8O43823 692 aaKnown RBP12.73□□□□□ -0.37
SHC1-202ENST00000368445 IFNGP01579 166 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 CD40LGP29965 261 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 HSD17B7P56937 341 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 ZNF554Q86TJ5 538 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 ATCAYQ86WG3 371 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 SLC37A3Q8NCC5 494 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 TOR1AIP2Q8NFQ8 470 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 CTHRC1Q96CG8 243 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 SLC25A36Q96CQ1 311 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 FN3KQ9H479 309 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 ZNF304Q9HCX3 659 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 MEPEQ9NQ76 525 aaPredicted RBP12.73□□□□□ -0.37
SHC1-202ENST00000368445 COPS7AQ9UBW8 275 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 TMEM5Q9Y2B1 443 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 SERINC4A6NH21 518 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 NCR1O76036 304 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 DEFA1P59665 94 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 DEFA3P59666 94 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 ARMC4Q5T2S8 1044 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 VSTM2LQ96N03 204 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 CDX2Q99626 313 aaPredicted RBP12.73□□□□□ -0.37
SHC1-202ENST00000368445 ISG20L2Q9H9L3 353 aaKnown RBP12.73□□□□□ -0.37
SHC1-202ENST00000368445 PALMDQ9NP74 551 aa12.73□□□□□ -0.37
SHC1-202ENST00000368445 IGHV1OR21-1A0A087WYE8 117 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 FUOMA2VDF0 154 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 LILRA5A6NI73 299 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.72□□□□□ -0.37
SHC1-202ENST00000368445 H3BSH0 61 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 FRYLO94915 3013 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 LIMS3P0CW19 117 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 LIMS4P0CW20 117 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 CT45A8P0DMV1 189 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 CT45A9P0DMV2 189 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 HK1P19367 917 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 TNFSF8P32971 234 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 UGT2B10P36537 528 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 SERTAD2Q14140 314 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 LPAL2Q16609 132 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 CT45A2Q5DJT8 189 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 C3orf38Q5JPI3 329 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 ULK3Q6PHR2 472 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 MFSD4AQ8N468 514 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 C7orf57Q8NEG2 295 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 CADM4Q8NFZ8 388 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 SLC30A2Q9BRI3 323 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 TBL1XR1Q9BZK7 514 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 QPCTLQ9NXS2 382 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 FAM186AA6NE01 2351 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 SOX1O00570 391 aaPredicted RBP12.72□□□□□ -0.37
SHC1-202ENST00000368445 POLR1CO15160 346 aaPredicted RBP12.72□□□□□ -0.37
SHC1-202ENST00000368445 ZGLP1P0C6A0 271 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 AHCYP23526 432 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 PYCR1P32322 319 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 RORAP35398 523 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 GRK6P43250 576 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 INPP1P49441 399 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 ERVK-25P63136 954 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 C11orf91Q3C1V1 193 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 NXNL2Q5VZ03 156 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 LAX1Q8IWV1 398 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 SIRT6Q8N6T7 355 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 OR1L3Q8NH93 324 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms