RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 RFX4Q33E94 735 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 ZNF468Q5VIY5 522 aaPredicted RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 BICRALQ6AI39 1079 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 LAIR2Q6ISS4 152 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 KLHL17Q6TDP4 642 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 Q6ZPB1 254 aaPredicted RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 MBOAT2Q6ZWT7 520 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 RPS19BP1Q86WX3 136 aaKnown RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 MEX3DQ86XN8 651 aaKnown RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 ZNF440Q8IYI8 595 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 PARP8Q8N3A8 854 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 TOR1AIP2Q8NFQ8 470 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 OR10G3Q8NGC4 313 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 OR5M3Q8NGP4 307 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 SLC22A8Q8TCC7 542 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 CYGBQ8WWM9 190 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 ACOT11Q8WXI4 607 aaPredicted RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 SLC38A4Q969I6 547 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 C3orf49Q96BT1 292 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 SPACA9Q96E40 222 aaPredicted RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 CNBD2Q96M20 576 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 PITX2Q99697 317 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 ADAM19Q9H013 955 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 TMEM27Q9HBJ8 222 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 PROK2Q9HC23 129 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 PAPOLBQ9NRJ5 636 aaKnown RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 KRT84Q9NSB2 600 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 NDRG4Q9ULP0 352 aaKnown RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 WASF3Q9UPY6 502 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 YARS2Q9Y2Z4 477 aaKnown RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 CHCHD2Q9Y6H1 151 aaPredicted RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 PTPRZ1P23471 2315 aaPredicted RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 IGKV1D-42A0A075B6H8 117 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 IGLV3-32A0A0A0MS00 114 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 LOC100130705A0A1B0GUX0 176 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 GTPBP1O00178 669 aaKnown RBP8.65□□□□□ -1.02
VTA1-201ENST00000367621 NDUFB5O43674 189 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 CHP2O43745 196 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 OR10H3O60404 316 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 POU2F1P14859 743 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 HPGDP15428 266 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 GSSP48637 474 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 IDH2P48735 452 aaKnown RBP8.65□□□□□ -1.02
VTA1-201ENST00000367621 RAD23AP54725 363 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 DLX5P56178 289 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 PSMA6P60900 246 aaKnown RBP8.65□□□□□ -1.02
VTA1-201ENST00000367621 ISL1P61371 349 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 MYBPC1Q00872 1141 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 NPRL3Q12980 569 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 ATP1A1-AS1Q5TC04 95 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 TTC23Q5W5X9 447 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 B3GNTL1Q67FW5 361 aaPredicted RBP8.65□□□□□ -1.02
VTA1-201ENST00000367621 TMEM81Q6P7N7 255 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 ZNF730Q6ZMV8 503 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 ATG4DQ86TL0 474 aaPredicted RBP8.65□□□□□ -1.02
VTA1-201ENST00000367621 VASH2Q86V25 355 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 KIF18BQ86Y91 864 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 RAB43Q86YS6 212 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 NRMQ8IXM6 262 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 LINC00471Q8N535 108 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 OR5W2Q8NH69 310 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 GPR119Q8TDV5 335 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 DUSP19Q8WTR2 217 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 FBLIM1Q8WUP2 373 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 TMCO6Q96DC7 493 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 SH3YL1Q96HL8 342 aaPredicted RBP8.65□□□□□ -1.02
VTA1-201ENST00000367621 MUS81Q96NY9 551 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 NR1H4Q96RI1 486 aaPredicted RBP8.65□□□□□ -1.02
VTA1-201ENST00000367621 TBL1XR1Q9BZK7 514 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 UCK2Q9BZX2 261 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 RIBC2Q9H4K1 309 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 Q9H521 79 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 GALNT9Q9HCQ5 603 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 MEPEQ9NQ76 525 aaPredicted RBP8.65□□□□□ -1.02
VTA1-201ENST00000367621 POFUT2Q9Y2G5 429 aa8.65□□□□□ -1.02
VTA1-201ENST00000367621 A0A087WUJ7 227 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 TRABD2BA6NFA1 517 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 SHISA8B8ZZ34 492 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 H3BNH8 94 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 HCRTR2O43614 444 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 SCO2O43819 266 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 RPSAP08865 295 aaKnown RBP8.64□□□□□ -1.03
VTA1-201ENST00000367621 LINGO3P0C6S8 592 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 LIPCP11150 499 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 OSMP13725 252 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 MAKP20794 623 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 ENDOUP21128 410 aaKnown RBP8.64□□□□□ -1.03
VTA1-201ENST00000367621 PTNP21246 168 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 CHMP24386 653 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 COL8A1P27658 744 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 CASP3P42574 277 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 SLC1A3P43003 542 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 SSR4P51571 173 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 CTBP2P56545 445 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 RPP38P78345 283 aaKnown RBP8.64□□□□□ -1.03
VTA1-201ENST00000367621 TAGLNQ01995 201 aaKnown RBP8.64□□□□□ -1.03
VTA1-201ENST00000367621 ALDH6A1Q02252 535 aaKnown RBP8.64□□□□□ -1.03
VTA1-201ENST00000367621 PRKCDQ05655 676 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 FHL1Q13642 323 aa8.64□□□□□ -1.03
VTA1-201ENST00000367621 RAPSNQ13702 412 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms