RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 TRPV6Q9H1D0 765 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 RPP21Q9H633 154 aaKnown RBP0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 PAK1IP1Q9NWT1 392 aaPredicted RBP0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 TMEM14AQ9Y6G1 99 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 BAHCC1Q9P281 2608 aa0.28□□□□□ -2.37
RNU6-238P-201ENST00000363313 A0A0G2JRQ6 117 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 P4HA2O15460 535 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 TTI1O43156 1089 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 RBFOX2O43251 390 aaKnown RBP eCLIP0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 NME2P1O60361 137 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 P04436 131 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 IL4P05112 153 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 ADRA2AP08913 450 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 SERPINA2P20848 420 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 OMGP23515 440 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 TMOD1P28289 359 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 MRPS6P82932 125 aaKnown RBP0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 TNFRSF9Q07011 255 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 IL15RAQ13261 267 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 ANKRD20A4Q4UJ75 823 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 SLC39A12Q504Y0 691 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 ANKRD20A2Q5SQ80 823 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 C1orf100Q5SVJ3 147 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNF684Q5T5D7 378 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 ANKRD20A1Q5TYW2 823 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 ANKRD20A3Q5VUR7 823 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 GOLGA7Q7Z5G4 137 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNF573Q86YE8 665 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 MFSD6LQ8IWD5 586 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 SYT14Q8NB59 555 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 NECAP1Q8NC96 275 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 DTX3LQ8TDB6 740 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 RAB7BQ96AH8 199 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 GBP5Q96PP8 586 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 OR2A5Q96R48 311 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 RNPEPL1Q9HAU8 725 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNF222Q9UK12 451 aa0.27□□□□□ -2.37
RNU6-238P-201ENST00000363313 TRAV34A0A0B4J273 112 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 A0A1W2PP18 115 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 SUPT3HO75486 399 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 IGLV2-23P01705 113 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 ALPPP05187 535 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 SLC26A3P40879 764 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 KPNA2P52292 529 aaKnown RBP0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 DLX1P56177 255 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 CCZ1BP86790 482 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 CCZ1P86791 482 aaPredicted RBP0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 SPIBQ01892 262 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 BAMBIQ13145 260 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 KBTBD12Q3ZCT8 623 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 FUT11Q495W5 492 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 KLF17Q5JT82 389 aaPredicted RBP0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 ATF7IP2Q5U623 682 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 LIPNQ5VXI9 398 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 CTRB2Q6GPI1 263 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNF562Q6V9R5 426 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 SPNS3Q6ZMD2 512 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 CCDC83Q8IWF9 413 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 TUSC5Q8IXB3 177 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 Q8NFD4 153 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 OR6C4Q8NGE1 309 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 ACER1Q8TDN7 264 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 TMEM45BQ96B21 275 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 DEFB118Q96PH6 123 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 TM2D3Q9BRN9 247 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 NDUFAF3Q9BU61 184 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNF416Q9BWM5 594 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNF717Q9BY31 904 aaPredicted RBP0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 NOX3Q9HBY0 568 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 SLC40A1Q9NP59 571 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 B3GNT2Q9NY97 397 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 NKIRAS2Q9NYR9 191 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 TREM2Q9NZC2 230 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNRD1Q9P1U0 126 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 MRPS33Q9Y291 106 aaKnown RBP0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 POMT1Q9Y6A1 747 aa0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 TET2Q6N021 2002 aaPredicted RBP0.26□□□□□ -2.37
RNU6-238P-201ENST00000363313 NPC1L1Q9UHC9 1359 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 PLEKHH1Q9ULM0 1364 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 A0A1W2PNN7 141 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 E9PBE3 544 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 H0YL77 283 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 IGLV6-57P01721 117 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 FERP16591 822 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 MAGEA4P43358 317 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 HMGCS1Q01581 520 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZSWIM7Q19AV6 140 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 BOLA3Q53S33 107 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 C1orf94Q6P1W5 598 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 PET117Q6UWS5 81 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNF620Q6ZNG0 422 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 LRRC70Q7Z2Q7 622 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 VPS36Q86VN1 386 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 AMZ2Q86W34 360 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 CLYBLQ8N0X4 340 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZSCAN4Q8NAM6 433 aaPredicted RBP0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 BRSK1Q8TDC3 778 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 TEKT1Q969V4 418 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 PGLYRP4Q96LB8 373 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 ROGDIQ9GZN7 287 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms