RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ZNF155Q12901 538 aaPredicted RBP13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 DEFB110Q30KQ9 67 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 FIGNL1Q6PIW4 674 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 METAP1DQ6UB28 335 aaPredicted RBP13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 FAM131AQ6UXB0 335 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 ZNF517Q6ZMY9 492 aaPredicted RBP13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 DBX2Q6ZNG2 339 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 NRARPQ7Z6K4 114 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 PIP4P1Q86T03 277 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 GID4Q8IVV7 300 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 RNF113BQ8IZP6 322 aaKnown RBP13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 DEFB124Q8NES8 71 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 BRIX1Q8TDN6 353 aaKnown RBP13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 CTHRC1Q96CG8 243 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 KATNB1Q9BVA0 655 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 TPK1Q9H3S4 243 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 FN3KQ9H479 309 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 POLE3Q9NRF9 147 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 ZNF223Q9UK11 482 aaPredicted RBP13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 GXYLT2A0PJZ3 443 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 CDHR4A6H8M9 788 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 FABP12A6NFH5 140 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 UNC119BA6NIH7 251 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 B4DGG1 531 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 FLRT2O43155 660 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 FMO6PO60774 539 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 CCNKO75909 580 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 LYPD3O95274 346 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 KRT8P05787 483 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 GKN3PP0CG01 181 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 SLC35E2P0CK97 266 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 GABRA3P34903 492 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 HTR3AP46098 478 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 RFX2P48378 723 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 BLKP51451 505 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 HNRNPKP61978 463 aaKnown RBP eCLIP13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 MXD1Q05195 221 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 OR1Q1Q15612 314 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 BAK1Q16611 211 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 PDZK1Q5T2W1 519 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 RPL13AP3Q6NVV1 102 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 SLC25A45Q8N413 288 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 C19orf47Q8N9M1 422 aaKnown RBP13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 OR9A4Q8NGU2 314 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 TMEM203Q969S6 136 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 DIRAS2Q96HU8 199 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 SAMD8Q96LT4 415 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 LRRC61Q9BV99 259 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 H2AFY2Q9P0M6 372 aaPredicted RBP13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 POLHQ9Y253 713 aa13.2□□□□□ -0.3
NIPAL3-203ENST00000358028 A0A1W2PQ09 198 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 CDC42EP2O14613 210 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 POLR1CO15160 346 aaPredicted RBP13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 BRINP1O60477 761 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 COQ9O75208 318 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 NKX2-2O95096 273 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 CBX7O95931 251 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 CTSBP07858 339 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 CLEC2LP0C7M8 214 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 PTNP21246 168 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 RNF144AP50876 292 aaPredicted RBP13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 FABP5Q01469 135 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 DGAT2L6Q6ZPD8 337 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 SHFQ7M4L6 423 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 ARHGEF39Q8N4T4 335 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 OR52R1Q8NGF1 315 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 HOXB13Q92826 284 aaPredicted RBP13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 ZNF221Q9UK13 617 aa13.19□□□□□ -0.3
NIPAL3-203ENST00000358028 OR10H2O60403 315 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 HCN1O60741 890 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 TMCC2O75069 709 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 GIMD1P0DJR0 217 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 GRK6P43250 576 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 NDUFA5Q16718 116 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 ZMAT1Q5H9K5 638 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 RSBN1Q5VWQ0 802 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 WDR88Q6ZMY6 472 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 SPATC1Q76KD6 591 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 MCATQ8IVS2 390 aaKnown RBP13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 VWA5B2Q8N398 1253 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 EID2Q8N6I1 236 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 ARIH2OSQ8N7S6 290 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 LMX1AQ8TE12 382 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 TMEM239Q8WW34 195 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 TOR4AQ9NXH8 423 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 CBLCQ9ULV8 474 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 TMEM5Q9Y2B1 443 aa13.18□□□□□ -0.3
NIPAL3-203ENST00000358028 SSX4O60224 188 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 SOX30O94993 753 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 SLC2A10O95528 541 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 ZGLP1P0C6A0 271 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 IFI30P13284 250 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 MAKP20794 623 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 CSRP1P21291 193 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 DDOSTP39656 456 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 GCGRP47871 477 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 NOVA1P51513 510 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 MAZP56270 477 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 CARTPTQ16568 116 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 MZT2AQ6P582 158 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms