RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PSMB1P20618 241 aaKnown RBP13.91□□□□□ -0.18
CHD4-201ENST00000357008 EPHA1P21709 976 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 RBMS2Q15434 407 aaKnown RBP13.91□□□□□ -0.18
CHD4-201ENST00000357008 DEFB110Q30KQ9 67 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 LEXMQ3ZCV2 418 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 GPR139Q6DWJ6 353 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 CD163Q86VB7 1156 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 BPIFB2Q8N4F0 458 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 CSNK1G1Q9HCP0 422 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 TESQ9UGI8 421 aaKnown RBP13.91□□□□□ -0.18
CHD4-201ENST00000357008 SLC22A7Q9Y694 548 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 LILRB5O75023 590 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 ATXN1LP0C7T5 689 aaKnown RBP13.91□□□□□ -0.18
CHD4-201ENST00000357008 OPCMLQ14982 345 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 VRK2Q86Y07 508 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 LUZP4Q9P127 313 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 KIF25Q9UIL4 384 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 USP22Q9UPT9 525 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 COL2A1P02458 1487 aaPredicted RBP13.91□□□□□ -0.18
CHD4-201ENST00000357008 A8MXE2 369 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 GMDSO60547 372 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 PTHP01270 115 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 SNRNP70P08621 437 aaKnown RBP13.91□□□□□ -0.18
CHD4-201ENST00000357008 CAV3P56539 151 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 OR1Q1Q15612 314 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 IL20RBQ6UXL0 311 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 PTRH1Q86Y79 214 aaKnown RBP13.91□□□□□ -0.18
CHD4-201ENST00000357008 TCEAL8Q8IYN2 117 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 C12orf76Q8N812 135 aaPredicted RBP13.91□□□□□ -0.18
CHD4-201ENST00000357008 SLC16A6O15403 523 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 SLC43A1O75387 559 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 ITGB7P26010 798 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 RABIFP47224 123 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 ADARB1P78563 741 aaKnown RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 SORDQ00796 357 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 MPP7Q5T2T1 576 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 HRH4Q9H3N8 390 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 TXNL4BQ9NX01 149 aaKnown RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 TRBV4-1A0A0J9YWV2 114 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 C17orf105B2RV13 164 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 RDH16O75452 317 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 LIPCP11150 499 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 JUNBP17275 347 aaPredicted RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 HIST1H1TP22492 207 aaPredicted RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 RPL23AP62750 156 aaKnown RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 MEX3BQ6ZN04 569 aaKnown RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 ZFAND1Q8TCF1 268 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 KHSRPQ92945 711 aaKnown RBP eCLIP13.9□□□□□ -0.188e-7■□□□□ 9.6
CHD4-201ENST00000357008 LIN37Q96GY3 246 aaPredicted RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 MICU1Q9BPX6 476 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 ACTR10Q9NZ32 417 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 CXXC1Q9P0U4 656 aaPredicted RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 OSGIN1Q9UJX0 560 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 ANKRD12Q6UB98 2062 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 MBLAC1A4D2B0 266 aaPredicted RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 TSTD3H0UI37 97 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 DPM1O60762 260 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 NCR1O76036 304 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 USP53Q70EK8 1073 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 OR6F1Q8NGZ6 308 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 CENPOQ9BU64 300 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 C1GALT1Q9NS00 363 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 F5H5K5 113 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 FOXE1O00358 373 aaPredicted RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 C1orf105O95561 183 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 KCTD11Q693B1 232 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 RNF113BQ8IZP6 322 aaKnown RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 C3orf49Q96BT1 292 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 DTD2Q96FN9 168 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 SLC25A31Q9H0C2 315 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 EGLN3Q9H6Z9 239 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 NIPAL2Q9H841 368 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 SLC6A14Q9UN76 642 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 PROS1P07225 676 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 SLC1A3P43003 542 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 MELKQ14680 651 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 ASB17Q8WXJ9 295 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 KLF16Q9BXK1 252 aaPredicted RBP13.9□□□□□ -0.18
CHD4-201ENST00000357008 USP3Q9Y6I4 520 aa13.9□□□□□ -0.18
CHD4-201ENST00000357008 VIPR2P41587 438 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 CTSCP53634 463 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 SYT6Q5T7P8 510 aaPredicted RBP13.89□□□□□ -0.19
CHD4-201ENST00000357008 A3GALT2U3KPV4 340 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 CD300LBA8K4G0 201 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 AFF3P51826 1226 aaKnown RBP13.89□□□□□ -0.19
CHD4-201ENST00000357008 RPS25P62851 125 aaKnown RBP13.89□□□□□ -0.19
CHD4-201ENST00000357008 CDK3Q00526 305 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 GPR18Q14330 331 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 SLC22A25Q6T423 547 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 LINC00299Q6ZSB3 139 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 MAVSQ7Z434 540 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 BTBD2Q9BX70 525 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 OR52A4PA6NMU1 304 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 POM121CA8CG34 1229 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 NFYAP23511 347 aaPredicted RBP13.89□□□□□ -0.19
CHD4-201ENST00000357008 PRKAR1BP31321 381 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 LIPIQ6XZB0 460 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 CPXM2Q8N436 756 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 SORCS2Q96PQ0 1159 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 SCML1Q9UN30 329 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms