RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 IFT52Q9Y366 437 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 AP4B1Q9Y6B7 739 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 CHD6Q8TD26 2715 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ZGRF1Q86YA3 2104 aa3.59□□□□□ -1.84
CNOT4-202ENST00000356162 NBEAQ8NFP9 2946 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PRORSD1PA6NEY8 169 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 AHRRA9YTQ3 701 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CCL21O00585 134 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 NDUFAB1O14561 156 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 EIF4EBP3O60516 100 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 FCMRO60667 390 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 NTN1O95631 604 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 LDLRP01130 860 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 LINGO3P0C6S8 592 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PABPC4LP0CB38 370 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 UQCRBP14927 111 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CPN1P15169 458 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF708P17019 499 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 AGAP20933 346 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ACVR2AP27037 513 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PRKAR1BP31321 381 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 LHX2P50458 406 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CCR4P51679 360 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 SMSP52788 366 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 EEFSECP57772 596 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 MTPNP58546 118 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 EEF1A1P68104 462 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 KCNJ10P78508 379 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 EPS8Q12929 822 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 SELENBP1Q13228 472 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CAPRIN1Q14444 709 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 NDUFAF6Q330K2 333 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ACSF3Q4G176 576 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 EMC4Q5J8M3 183 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 MRPL2Q5T653 305 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 INTS11Q5TA45 600 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 RIPPLY2Q5TAB7 128 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 OR5M10Q6IEU7 315 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 REEP3Q6NUK4 255 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ARSKQ6UWY0 536 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF836Q6ZNA1 936 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 BEND4Q6ZU67 534 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 FJX1Q86VR8 437 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 JAZF1Q86VZ6 243 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CALHM3Q86XJ0 350 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 KRT73Q86Y46 540 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PTOV1Q86YD1 416 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 LACC1Q8IV20 430 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF808Q8N4W9 903 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 POU5F2Q8N7G0 328 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CCDC197Q8NCU1 140 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 OR52P1PQ8NH57 321 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 POC1BQ8TC44 478 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ZPLD1Q8TCW7 415 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 GPR119Q8TDV5 335 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 TMEM234Q8WY98 164 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 LRRC58Q96CX6 371 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CMTM5Q96DZ9 223 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 WDYHV1Q96HA8 205 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 MRGPRX4Q96LA9 322 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CCT8L2Q96SF2 557 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 TREX2Q9BQ50 279 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CLEC4MQ9H2X3 399 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ARMC7Q9H6L4 198 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 KAT8Q9H7Z6 458 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PNPLA3Q9NST1 481 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ACER3Q9NUN7 267 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ERRFI1Q9UJM3 462 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ACAD8Q9UKU7 415 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CAMK2AQ9UQM7 478 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 KIAA1549Q9HCM3 1950 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PIEZO2Q9H5I5 2752 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ESPL1Q14674 2120 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 OR2M5A3KFT3 312 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CD8B2A6NJW9 211 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 GJE1A6NN92 205 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 KIAA1324LA8MWY0 1029 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 LRRTM2O43300 516 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 SEMA7AO75326 666 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PGM3O95394 542 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 NUDT14O95848 222 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 FREM3P0C091 2139 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 UBTFL6P0CB48 400 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PRKCAP17252 672 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 SLC6A2P23975 617 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 GZMMP51124 257 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CLDN18P56856 261 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PCBP3P57721 371 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 RPS3AP61247 264 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ADORA2A-AS1P86434 159 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 SRSF1Q07955 248 aaKnown RBP eCLIP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 QPRTQ15274 297 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 GXYLT1Q4G148 440 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PDSS1Q5T2R2 415 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 GKAP1Q5VSY0 366 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 NSUN5P2Q63ZY6 315 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 C8orf82Q6P1X6 216 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 B3GNT6Q6ZMB0 384 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms