RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GCM2O75603 506 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 AK1P00568 194 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 PLAUP00749 431 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 ME2P23368 584 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 DNASE1P24855 282 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 CHI3L1P36222 383 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 KCNJ5P48544 419 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 KHKP50053 298 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 ADAM8P78325 824 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 FOXD4Q12950 439 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 SELENBP1Q13228 472 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 DPY19L1Q2PZI1 675 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 DEFB113Q30KQ7 82 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 NXNQ6DKJ4 435 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 TFAP2EQ6VUC0 442 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 PLEKHM3Q6ZWE6 761 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 ATG4DQ86TL0 474 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 WFDC11Q8NEX6 87 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 TOR1AIP2Q8NFQ8 470 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 VPS33AQ96AX1 596 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 ZNF775Q96BV0 537 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 AURKBQ96GD4 344 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 PANX1Q96RD7 426 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 ZNF300Q96RE9 604 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 MED18Q9BUE0 208 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 RSPO3Q9BXY4 272 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 SLCO1B3Q9NPD5 702 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 CTPS2Q9NRF8 586 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 EXD2Q9NVH0 621 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 NDRG3Q9UGV2 375 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 EMC9Q9Y3B6 208 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 ZNF814B7Z6K7 855 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 RAMP1O60894 148 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 PLGP00747 810 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 RYKP34925 604 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 CTBP2P56545 445 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 CBFBQ13951 182 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 PDCD4Q53EL6 469 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 GPAT3Q53EU6 434 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 ZNF621Q6ZSS3 439 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 FCRLAQ7L513 359 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 TGIF2LYQ8IUE0 185 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 MBD6Q96DN6 1003 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 ARL5BQ96KC2 179 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 OR5B2Q96R09 309 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 PSD2Q9BQI7 771 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 EBF4Q9BQW3 602 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 CCDC106Q9BWC9 280 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 PAQR5Q9NXK6 330 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 PRSS50Q9UI38 385 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 ACANP16112 2415 aa14.88□□□□□ -0.03
PDLIM7-201ENST00000355572 DIAPH2O60879 1101 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 SOX30O94993 753 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 GUSBP08236 651 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 HOXB9P17482 250 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 RPS4Y1P22090 263 aaKnown RBP14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 NTF4P34130 210 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 AGBL2Q5U5Z8 902 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 ATG16L1Q676U5 607 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 SEZ6L2Q6UXD5 910 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 GABRG1Q8N1C3 465 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 RAB3IL1Q8TBN0 382 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 PIWIL2Q8TC59 973 aaKnown RBP14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 CPNE4Q96A23 557 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 ALPK1Q96QP1 1244 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 SLC39A3Q9BRY0 314 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 OR11A1Q9GZK7 315 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 HHATLQ9HCP6 504 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 DLL4Q9NR61 685 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 ACER3Q9NUN7 267 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 NKIRAS1Q9NYS0 192 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 KLHL13Q9P2N7 655 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 STOML1Q9UBI4 398 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 CHST2Q9Y4C5 530 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 ROS1P08922 2347 aa14.87□□□□□ -0.03
PDLIM7-201ENST00000355572 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 TRPC5OSA6NMA1 111 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 KLF11O14901 512 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 CASKO14936 926 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 ERLIN1O75477 346 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 ETFAP13804 333 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 KCNJ10P78508 379 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 MERTKQ12866 999 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 KEAP1Q14145 624 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 RPS26P11Q5JNZ5 115 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 PDSS1Q5T2R2 415 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 EPGNQ6UW88 154 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 EIF3MQ7L2H7 374 aaKnown RBP14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 ADGRG3Q86Y34 549 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 KIRREL3Q8IZU9 778 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 C10orf111Q8N326 155 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 VPS37AQ8NEZ2 397 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 ST8SIA1Q92185 356 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 GSX1Q9H4S2 264 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 POLE3Q9NRF9 147 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 SDR39U1Q9NRG7 319 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 USH1CQ9Y6N9 552 aa14.86□□□□□ -0.03
PDLIM7-201ENST00000355572 AGAP5A6NIR3 686 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 SLC22A3O75751 556 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 GOSR1O95249 250 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms