RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ZNF883P0CG24 379 aa23.55■■□□□ 1.36
CLK2-201ENST00000355560 LCN1P31025 176 aa23.55■■□□□ 1.36
CLK2-201ENST00000355560 EMP2P54851 167 aa23.55■■□□□ 1.36
CLK2-201ENST00000355560 APCDD1LQ8NCL9 501 aa23.55■■□□□ 1.36
CLK2-201ENST00000355560 C17orf47Q8NEP4 570 aa23.55■■□□□ 1.36
CLK2-201ENST00000355560 EXOSC3Q9NQT5 275 aaKnown RBP23.55■■□□□ 1.36
CLK2-201ENST00000355560 MED17Q9NVC6 651 aa23.55■■□□□ 1.36
CLK2-201ENST00000355560 LNP1A1A4G5 178 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 SNTNA6NMZ2 147 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 RCBTB2O95199 551 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 RNF4P78317 190 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 SPCS2Q15005 226 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 NCF4Q15080 339 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 ZNF367Q7RTV3 350 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 C3orf49Q96BT1 292 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 BCL7BQ9BQE9 202 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 ENKD1Q9H0I2 346 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 SLC24A3Q9HC58 644 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 A0A087WUJ7 227 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 KDM4EB2RXH2 506 aaPredicted RBP23.54■■□□□ 1.36
CLK2-201ENST00000355560 HMGN1P05114 100 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 GP1BAP07359 652 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 MED22Q15528 200 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 SMARCD3Q6STE5 483 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 SLCO6A1Q86UG4 719 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 OR51A7Q8NH64 312 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 RHBDD1Q8TEB9 315 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 OR5M11Q96RB7 305 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 CRB3Q9BUF7 120 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 RTN4RQ9BZR6 473 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 SEMA4CQ9C0C4 833 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 AKIRIN1Q9H9L7 192 aaPredicted RBP23.54■■□□□ 1.36
CLK2-201ENST00000355560 RXFP3Q9NSD7 469 aa23.54■■□□□ 1.36
CLK2-201ENST00000355560 GPR179Q6PRD1 2367 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 BHLHE40O14503 412 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 SLC2A10O95528 541 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 HSMCR30P0CW71 290 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 CCL4P13236 92 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 ZNF28P17035 718 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 ACP1P24666 158 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 PAPD4Q6PIY7 484 aaKnown RBP23.53■■□□□ 1.36
CLK2-201ENST00000355560 THSD4Q6ZMP0 1018 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 OAFQ86UD1 273 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 NFAM1Q8NET5 270 aaPredicted RBP23.53■■□□□ 1.36
CLK2-201ENST00000355560 SLC26A1Q9H2B4 701 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 PCDHGA5Q9Y5G8 931 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 HCN1O60741 890 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 LSM3P62310 102 aaKnown RBP23.53■■□□□ 1.36
CLK2-201ENST00000355560 WBP2NLQ6ICG8 309 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 DBX2Q6ZNG2 339 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 LOXL4Q96JB6 756 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 ERGIC3Q9Y282 383 aa23.53■■□□□ 1.36
CLK2-201ENST00000355560 WDFY3Q8IZQ1 3526 aa23.52■■□□□ 1.36
CLK2-201ENST00000355560 PNLIPRP2P54317 469 aa23.52■■□□□ 1.36
CLK2-201ENST00000355560 ARMCX4Q5H9R4 360 aa23.52■■□□□ 1.36
CLK2-201ENST00000355560 OR52I1Q8NGK6 324 aa23.52■■□□□ 1.36
CLK2-201ENST00000355560 SH3YL1Q96HL8 342 aaPredicted RBP23.52■■□□□ 1.36
CLK2-201ENST00000355560 CLEC2DQ9UHP7 191 aa23.52■■□□□ 1.36
CLK2-201ENST00000355560 PCDHGB2Q9Y5G2 931 aa23.52■■□□□ 1.36
CLK2-201ENST00000355560 FLRT2O43155 660 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 BCL10O95999 233 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 CDH11P55287 796 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 MRPL14Q6P1L8 145 aaKnown RBP23.51■■□□□ 1.35
CLK2-201ENST00000355560 LNX2Q8N448 690 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 RNFT2Q96EX2 444 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 LPAR4Q99677 370 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 IFT27Q9BW83 186 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 DIMT1Q9UNQ2 313 aaKnown RBP23.51■■□□□ 1.35
CLK2-201ENST00000355560 TTC28Q96AY4 2481 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 SLC22A1O15245 554 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 RAB36O95755 333 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 MTNR1AP48039 350 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 ZNF117Q03924 483 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 AADACL4Q5VUY2 407 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 MARCH3Q86UD3 253 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 RPL3LQ92901 407 aaKnown RBP23.51■■□□□ 1.35
CLK2-201ENST00000355560 RFKQ969G6 155 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 LGALS12Q96DT0 336 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 WDR77Q9BQA1 342 aaPredicted RBP23.51■■□□□ 1.35
CLK2-201ENST00000355560 TBL1XR1Q9BZK7 514 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 TIMMDC1Q9NPL8 285 aa23.51■■□□□ 1.35
CLK2-201ENST00000355560 ALG1L2C9J202 215 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 HCRTR2O43614 444 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 PTP4A3O75365 173 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 APOL3O95236 402 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 GRK5P34947 590 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 NRG3P56975 720 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 VBP1P61758 197 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 RAB40BQ12829 278 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 KLHL22Q53GT1 634 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 CPEB2Q7Z5Q1 589 aaKnown RBP23.5■■□□□ 1.35
CLK2-201ENST00000355560 PMEPA1Q969W9 287 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 C8orf44Q96CB5 159 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 MGLLQ99685 303 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 HINT3Q9NQE9 182 aaKnown RBP23.5■■□□□ 1.35
CLK2-201ENST00000355560 ICAM5Q9UMF0 924 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 PPIEQ9UNP9 301 aaKnown RBP23.5■■□□□ 1.35
CLK2-201ENST00000355560 R4GN57 208 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 A0A1W2PQD3 144 aa23.5■■□□□ 1.35
CLK2-201ENST00000355560 NDUFB5O43674 189 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms