RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ELK1P19419 428 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC14A1Q13336 389 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 H3F3CQ6NXT2 135 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR10Z1Q8NGY1 313 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR5M11Q96RB7 305 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR52A5Q9H2C5 316 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 WIF1Q9Y5W5 379 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 A0A087WZY1 265 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 VSTM5A8MXK1 200 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 SURF4O15260 269 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 STK17BO94768 372 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 PMS2P2O95744 297 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 CR2P20023 1033 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 CCR9P51686 369 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 NR0B1P51843 470 aaKnown RBP11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 TLE4Q04727 773 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 PDZK1IP1Q13113 114 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 LPCAT3Q6P1A2 487 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 MEX3BQ6ZN04 569 aaKnown RBP11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 GDPD3Q7L5L3 318 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 PELI3Q8N2H9 469 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 TM9SF4Q92544 642 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 PDLIM5Q96HC4 596 aaKnown RBP11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 PCYT2Q99447 389 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLAMF7Q9NQ25 335 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 FBXL4Q9UKA2 621 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 ETV7Q9Y603 341 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 PRICKLE3O43900 615 aaPredicted RBP11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 EPHA1P21709 976 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 SUOXP51687 545 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 GLO1Q04760 184 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC14A2Q15849 920 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 MZB1Q8WU39 189 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 TRMT2BQ96GJ1 504 aaKnown RBP11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 IL17CQ9P0M4 197 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 MEIS3P2A8K0S8 358 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 FAM171A2A8MVW0 826 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 ADAM23O75077 832 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 SPI1P17947 270 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 TRA2BP62995 288 aaKnown RBP11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 KDM8Q8N371 416 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 SFXN2Q96NB2 322 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF582Q96NG8 517 aaPredicted RBP11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 CERS4Q9HA82 394 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 RHBDD3Q9Y3P4 386 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 MROH6A6NGR9 719 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 PLGLB1Q02325 96 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 NNATQ16517 81 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 LGALS14Q8TCE9 139 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 PHYHIPQ92561 330 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 DNAJC5Q9H3Z4 198 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 C1orf123Q9NWV4 160 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 DLG5Q8TDM6 1919 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 MYH2Q9UKX2 1941 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC9B1P1A6NJY1 282 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 D6RAR5 112 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 F2P00734 622 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 HEXBP07686 556 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 UBL4AP11441 157 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 LCTLQ6UWM7 567 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SERINC5Q86VE9 423 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 GKN2Q86XP6 184 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 CSNK1A1LQ8N752 337 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC25A46Q96AG3 418 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 NIPSNAP3BQ9BS92 247 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLCO5A1Q9H2Y9 848 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 ACKR4Q9NPB9 350 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 TRAPPC6AO75865 159 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 GJB5O95377 273 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SIX6O95475 246 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 ELNP15502 786 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 NME2P22392 152 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC6A8P48029 635 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 TNK1Q13470 666 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 KIAA0141Q14154 515 aaPredicted RBP11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 KDM4DQ6B0I6 523 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SBSNQ6UWP8 590 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 RBMS3Q6XE24 437 aaKnown RBP11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 ASB17Q8WXJ9 295 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 YIPF5Q969M3 257 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 DDIT4LQ96D03 193 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 C14orf79Q96F83 325 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 TRABD2BA6NFA1 517 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 J3KTA2 159 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SEC14L5O43304 696 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 CLEC3AO75596 197 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 MFGE8Q08431 387 aaPredicted RBP11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SCGB2A2Q13296 93 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 TAZQ16635 292 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 UNQ6126/PRO20091Q6UXV3 157 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 GPR155Q7Z3F1 870 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 DEFB132Q7Z7B7 95 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR8J2Q8NGG1 315 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR51Q1Q8NH59 317 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 IRF7Q92985 503 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 MIB2Q96AX9 1013 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 ATP13A2Q9NQ11 1180 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC22A7Q9Y694 548 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 WNT6Q9Y6F9 365 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 BHLHE40O14503 412 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms